VIT_01s0011g03470 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_01s0011g03470 T006024_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK24580.1
M01101_2.00 		Cannabis sativa
VGCCGGCM
KGCCGGCB		 PBM
Lambert et al.(2019)
pTH11280 		0.754 0.857
ERF118
M01047_2.00 		Arabidopsis thaliana
NCGCCGYNN
NNRCGGCGN		 PBM
Sullivan et al.(2014)
pTH7330 		0.727 0.714
ERF118
M06591_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
CRF10_col100_a 		0.727 0.714
ERF118
M06592_2.00 		Arabidopsis thaliana
NGDATCHNDGATTCNNH
DNNGAATCHNDGATHCN		 Dap-seq
OMalley et al.(2016)
CRF10_colamp_a 		0.727 0.714
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_01s0011g03470.t01 AP2 105 156

Links

Other AP2 family TFs
Other Vitis vinifera TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjSGA_016572.1 Lotus japonicus LjSGA_016572.1 I 0.790
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I 0.790
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I 0.790
Cla008128 Citrullus lanatus Cla008128 I 0.779
Cucsa.365320 Cucumis sativus Cucsa.365320 I 0.779
GLYMA10G42130 Glycine max GLYMA10G42130 I 0.771
PK24580.1 Cannabis sativa PK24580.1 D 0.754
Solyc04g007180.1 Solanum lycopersicum Solyc04g007180.1 I 0.752
PGSC0003DMG400015880 Solanum tuberosum PGSC0003DMG400015880 I 0.752
MDP0000119956 Malus domestica MDP0000119956 I 0.750
MDP0000743350 Malus domestica MDP0000743350 I 0.750
Ca_05485 Cicer arietinum Ca_05485 I 0.747
chr2.CM0903.260.nd Lotus japonicus chr2.CM0903.260.nd I 0.743
GLYMA01G20383 Glycine max GLYMA01G20383 I 0.728
ERF118 Arabidopsis thaliana AT1G68550 D 0.727
MDP0000759299 Malus domestica MDP0000759299 I 0.723
GLYMA08G30716 Glycine max GLYMA08G30716 I 0.723
GLYMA20G24920 Glycine max GLYMA20G24920 I 0.723
Eucgr.G02326 Eucalyptus grandis Eucgr.G02326 I 0.720
Cucsa.256230 Cucumis sativus Cucsa.256230 I 0.718
Cla021763 Citrullus lanatus Cla021763 I 0.717
Pm029052 Prunus mume Pm029052 I 0.714
Solyc05g009450.1 Solanum lycopersicum Solyc05g009450.1 I 0.713
gene25185-v1.0-hybrid Fragaria vesca gene25185-v1.0-hybrid I 0.709
Cla000729 Citrullus lanatus Cla000729 I 0.707
GLYMA08G15830 Glycine max GLYMA08G15830 I 0.704
mgf006610m Mimulus guttatus mgf006610m I 0.701
MDP0000166779 Malus domestica MDP0000166779 N 0.701
PGSC0003DMG400014541 Solanum tuberosum PGSC0003DMG400014541 I 0.697
PRUPE_ppa008514mg Prunus persica PRUPE_ppa008514mg I 0.697
cassava43300.valid.m1 Manihot esculenta cassava43300.valid.m1 I 0.694
27524.m000298 Ricinus communis 27524.m000298 I 0.694
Cucsa.121430 Cucumis sativus Cucsa.121430 N 0.694
gene03751-v1.0-hybrid Fragaria vesca gene03751-v1.0-hybrid I 0.691
TCM_011811 Theobroma cacao TCM_011811 I 0.689
POPTR_0008s11900 Populus trichocarpa POPTR_0008s11900 I 0.689
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.689
SapurV1A.0079s0190 Salix purpurea SapurV1A.0079s0190 I 0.689
cassava35757.valid.m1 Manihot esculenta cassava35757.valid.m1 I 0.686
cassava35758.valid.m1 Manihot esculenta cassava35758.valid.m1 I 0.686
Carubv10017705m.g Capsella rubella Carubv10017705m.g I 0.683
Cagra.0483s0087 Capsella grandiflora Cagra.0483s0087 I 0.683
GSMUA_Achr7G18930_001 Musa acuminata GSMUA_Achr7G18930_001 I 0.682
Bostr.13158s0163 Boechera stricta Bostr.13158s0163 I 0.681
Pavir.Da01893 Panicum virgatum Pavir.Da01893 N 0.680