VIT_07s0031g00720 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_07s0031g00720 T006064_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-6
M00717_2.00
Arabidopsis thaliana
NBGCYGNH

DNCRGCVN
PBM
Chang et al.(2013)
pTH7225
0.730 0.760
RAP2-6
M00841_2.00
Arabidopsis thaliana
NGCCGHHNNN

NNNDDCGGCN
PBM
Franco-Zorrilla et al.(2014)
RAP2.6
0.730 0.760
RAP2-6
M06579_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYMD

HKRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
RAP26_col_a
0.730 0.760
RAP2-6
M06580_2.00
Arabidopsis thaliana
CGCCGY

RCGGCG
Dap-seq
OMalley et al.(2016)
RAP26_colamp_a
0.730 0.760
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.715 0.800
ERF115
M06657_2.00
Arabidopsis thaliana
CCGCCGYMRYHDCCR

YGGHDRYKRCGGCGG
Dap-seq
OMalley et al.(2016)
ERF115_col_a
0.708 0.740
ERF115
M06658_2.00
Arabidopsis thaliana
CKCCGCCGYMRYHDY

RHDRYKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ERF115_colamp_a
0.708 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_07s0031g00720.t01 AP2 95 146

Links

Other AP2 family TFs
Other Vitis vinifera TFs

273 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava40570.m1 Manihot esculenta cassava40570.m1 I 0.798
GSMUA_Achr6G02310_001 Musa acuminata GSMUA_Achr6G02310_001 I 0.752
OBART09G12810 Oryza barthii OBART09G12810 I 0.749
BGIOSGA030907 Oryza indica BGIOSGA030907 I 0.749
OS09G0457900 Oryza sativa OS09G0457900 I 0.749
OGLUM09G13230 Oryza glumaepatula OGLUM09G13230 I 0.749
ONIVA03G20710 Oryza nivara ONIVA03G20710 I 0.749
ORUFI09G13770 Oryza rufipogon ORUFI09G13770 I 0.749
ORGLA09G0098000 Oryza glaberrima ORGLA09G0098000 I 0.749
PGSC0003DMG400018803 Solanum tuberosum PGSC0003DMG400018803 I 0.745
GLYMA02G08835 Glycine max GLYMA02G08835 I 0.745
GLYMA16G27950 Glycine max GLYMA16G27950 I 0.745
Solyc12g056590.1 Solanum lycopersicum Solyc12g056590.1 I 0.745
Eucgr.F02691 Eucalyptus grandis Eucgr.F02691 I 0.745
SapurV1A.0826s0010 Salix purpurea SapurV1A.0826s0010 I 0.745
chr2.LjT11L13.40.nc Lotus japonicus chr2.LjT11L13.40.nc I 0.745
Thhalv10014579m.g Eutrema salsugineum Thhalv10014579m.g I 0.744
chr4.CM0175.50.nd Lotus japonicus chr4.CM0175.50.nd I 0.742
Gorai.009G255400 Gossypium raimondii Gorai.009G255400 I 0.739
GRMZM2G457562 Zea mays GRMZM2G457562 I 0.737
Cagra.14503s0008 Capsella grandiflora Cagra.14503s0008 I 0.737
GRMZM2G016434 Zea mays GRMZM2G016434 I 0.737
LPERR05G14130 Leersia perrieri LPERR05G14130 I 0.737
OPUNC11G03940 Oryza punctata OPUNC11G03940 I 0.737
Pavir.J17038 Panicum virgatum Pavir.J17038 I 0.737
OPUNC05G15760 Oryza punctata OPUNC05G15760 I 0.737
Lus10028679.g Linum usitatissimum Lus10028679.g I 0.737
RRTF1 Vitis vinifera VIT_03s0063g00460 I 0.737
GLYMA20G30835 Glycine max GLYMA20G30835 I 0.736
Cucsa.363830 Cucumis sativus Cucsa.363830 I 0.736
ERF110 Vitis vinifera VIT_18s0072g00260 I 0.736
29863.m001066 Ricinus communis 29863.m001066 I 0.736
GRMZM2G544539 Zea mays GRMZM2G544539 I 0.736
Cla014021 Citrullus lanatus Cla014021 I 0.736
Pm022509 Prunus mume Pm022509 I 0.736
cassava12737.valid.m1 Manihot esculenta cassava12737.valid.m1 I 0.736
evm.TU.supercontig_49.94 Carica papaya evm.TU.supercontig_49.94 I 0.736
orange1.1g013225m.g Citrus sinensis orange1.1g013225m.g I 0.736
Gorai.005G078100 Gossypium raimondii Gorai.005G078100 I 0.736
MDP0000242979 Malus domestica MDP0000242979 I 0.736
MDP0000235028 Malus domestica MDP0000235028 I 0.736
Gorai.010G131500 Gossypium raimondii Gorai.010G131500 I 0.736
Ciclev10001138m.g Citrus clementina Ciclev10001138m.g I 0.736
Eucgr.F04203 Eucalyptus grandis Eucgr.F04203 I 0.736
GLYMA10G36760 Glycine max GLYMA10G36760 I 0.736
SapurV1A.0134s0150 Salix purpurea SapurV1A.0134s0150 I 0.736
Bostr.12302s0024 Boechera stricta Bostr.12302s0024 I 0.736
Carubv10028647m.g Capsella rubella Carubv10028647m.g I 0.736
Sb05g004170 Sorghum bicolor Sb05g004170 I 0.735
evm.TU.supercontig_55.155 Carica papaya evm.TU.supercontig_55.155 I 0.734
OS11G0168500 Oryza sativa OS11G0168500 I 0.733
OGLUM11G04050 Oryza glumaepatula OGLUM11G04050 I 0.733
ORUFI11G04200 Oryza rufipogon ORUFI11G04200 I 0.733
ORGLA11G0040400 Oryza glaberrima ORGLA11G0040400 I 0.733
Cla003851 Citrullus lanatus Cla003851 I 0.733
ONIVA11G04340 Oryza nivara ONIVA11G04340 I 0.733
BGIOSGA034432 Oryza indica BGIOSGA034432 I 0.733
Cucsa.365850 Cucumis sativus Cucsa.365850 I 0.733
GSMUA_Achr10G09560_001 Musa acuminata GSMUA_Achr10G09560_001 I 0.733
MTR_6g037610 Medicago truncatula MTR_6g037610 I 0.733
BRADI2G56140 Brachypodium distachyon BRADI2G56140 I 0.733
Si026709m.g Setaria italica Si026709m.g I 0.732
chr5.CM0052.240.nd Lotus japonicus chr5.CM0052.240.nd I 0.732
POPTR_0002s06620 Populus trichocarpa POPTR_0002s06620 I 0.732
Pavir.Ha01720 Panicum virgatum Pavir.Ha01720 I 0.732
TCM_035671 Theobroma cacao TCM_035671 I 0.732
Traes_5BS_80C46D9C4 Triticum aestivum Traes_5BS_80C46D9C4 I 0.732
MLOC_68290 Hordeum vulgare MLOC_68290 I 0.732
Traes_5BL_60FC12DA6 Triticum aestivum Traes_5BL_60FC12DA6 I 0.732
Pavir.Hb01784 Panicum virgatum Pavir.Hb01784 I 0.732
Pavir.J04335 Panicum virgatum Pavir.J04335 I 0.731
Pavir.Cb02005 Panicum virgatum Pavir.Cb02005 I 0.731
GRMZM2G076896 Zea mays GRMZM2G076896 I 0.730
RAP2-6 Arabidopsis thaliana AT1G43160 D 0.730
PGSC0003DMG400006369 Solanum tuberosum PGSC0003DMG400006369 I 0.728
mgf000075m Mimulus guttatus mgf000075m I 0.728
Solyc04g071770.2 Solanum lycopersicum Solyc04g071770.2 I 0.728
mgf019280m Mimulus guttatus mgf019280m I 0.727
Ca_19135 Cicer arietinum Ca_19135 I 0.727
LPERR12G03800 Leersia perrieri LPERR12G03800 I 0.726
Ca_04370 Cicer arietinum Ca_04370 I 0.726
Ca_18387 Cicer arietinum Ca_18387 I 0.726
ORGLA01G0324200 Oryza glaberrima ORGLA01G0324200 I 0.724
ORGLA05G0154400 Oryza glaberrima ORGLA05G0154400 I 0.724
ORUFI05G19030 Oryza rufipogon ORUFI05G19030 I 0.724
POPTR_0005s21690 Populus trichocarpa POPTR_0005s21690 I 0.724
Pavir.Ea03713 Panicum virgatum Pavir.Ea03713 I 0.724
OS05G0437100 Oryza sativa OS05G0437100 I 0.724
OS01G0868000 Oryza sativa OS01G0868000 I 0.724
Pavir.J03755 Panicum virgatum Pavir.J03755 I 0.724
MDP0000668122 Malus domestica MDP0000668122 I 0.724
ORUFI01G41960 Oryza rufipogon ORUFI01G41960 I 0.724
Si002010m.g Setaria italica Si002010m.g I 0.724
OMERI01G35460 Oryza meridionalis OMERI01G35460 I 0.724
GRMZM2G100727 Zea mays GRMZM2G100727 I 0.724
BGIOSGA019928 Oryza indica BGIOSGA019928 I 0.724
BRADI2G24170 Brachypodium distachyon BRADI2G24170 I 0.724
OGLUM01G42800 Oryza glumaepatula OGLUM01G42800 I 0.724
GRMZM2G149756 Zea mays GRMZM2G149756 I 0.724
LPERR02G14620 Leersia perrieri LPERR02G14620 I 0.724
ONIVA01G43260 Oryza nivara ONIVA01G43260 I 0.724
MLOC_7891 Hordeum vulgare MLOC_7891 I 0.724
LPERR01G33110 Leersia perrieri LPERR01G33110 I 0.724
BGIOSGA000428 Oryza indica BGIOSGA000428 I 0.724
ONIVA05G18720 Oryza nivara ONIVA05G18720 I 0.724
cassava19043.valid.m1 Manihot esculenta cassava19043.valid.m1 I 0.723
Cagra.3842s0001 Capsella grandiflora Cagra.3842s0001 I 0.723
cassava10717.m1 Manihot esculenta cassava10717.m1 I 0.723
gene27604-v1.0-hybrid Fragaria vesca gene27604-v1.0-hybrid I 0.723
GSMUA_Achr6G25680_001 Musa acuminata GSMUA_Achr6G25680_001 I 0.723
MTR_1g098460 Medicago truncatula MTR_1g098460 I 0.723
cassava19042.valid.m1 Manihot esculenta cassava19042.valid.m1 I 0.723
Carubv10010478m.g Capsella rubella Carubv10010478m.g I 0.723
Lus10022426.g Linum usitatissimum Lus10022426.g I 0.721
VIT_07s0031g00710 Vitis vinifera VIT_07s0031g00710 I 0.721
chr1.CM1880.220.nd Lotus japonicus chr1.CM1880.220.nd I 0.721
30131.m006971 Ricinus communis 30131.m006971 I 0.721
cassava45576.m1 Manihot esculenta cassava45576.m1 I 0.721
Cla019618 Citrullus lanatus Cla019618 I 0.720
GLYMA19G27790 Glycine max GLYMA19G27790 I 0.720
TCM_017352 Theobroma cacao TCM_017352 I 0.720
GLYMA16G05190 Glycine max GLYMA16G05190 I 0.720
Cucsa.156890 Cucumis sativus Cucsa.156890 I 0.720
Ciclev10032575m.g Citrus clementina Ciclev10032575m.g I 0.719
30147.m014403 Ricinus communis 30147.m014403 I 0.719
orange1.1g036963m.g Citrus sinensis orange1.1g036963m.g I 0.719
VIT_14s0068g01040 Vitis vinifera VIT_14s0068g01040 I 0.719
Solyc12g042210.1 Solanum lycopersicum Solyc12g042210.1 I 0.718
BRADI3G38140 Brachypodium distachyon BRADI3G38140 I 0.718
Cla007205 Citrullus lanatus Cla007205 I 0.718
Cucsa.349200 Cucumis sativus Cucsa.349200 I 0.718
Si018024m.g Setaria italica Si018024m.g I 0.717
ONIVA02G20490 Oryza nivara ONIVA02G20490 I 0.717
Sb04g021160 Sorghum bicolor Sb04g021160 I 0.717
ORUFI02G19470 Oryza rufipogon ORUFI02G19470 I 0.717
evm.TU.supercontig_13.175 Carica papaya evm.TU.supercontig_13.175 I 0.717
BGIOSGA006362 Oryza indica BGIOSGA006362 I 0.717
OPUNC02G16450 Oryza punctata OPUNC02G16450 I 0.717
GLYMA16G26320 Glycine max GLYMA16G26320 I 0.716
OBART02G18470 Oryza barthii OBART02G18470 I 0.716
GLYMA02G07310 Glycine max GLYMA02G07310 I 0.716
OS08G0474000 Oryza sativa OS08G0474000 I 0.715
OPUNC08G15760 Oryza punctata OPUNC08G15760 I 0.715
LOC_Os08g36920 Oryza sativa LOC_Os08g36920 D 0.715
orange1.1g005229m.g Citrus sinensis orange1.1g005229m.g I 0.715
OLONG_013554 Oryza longistaminata OLONG_013554 I 0.715
Ciclev10003903m.g Citrus clementina Ciclev10003903m.g I 0.715
OGLUM08G18720 Oryza glumaepatula OGLUM08G18720 I 0.715
Si014237m.g Setaria italica Si014237m.g I 0.715
ONIVA08G19930 Oryza nivara ONIVA08G19930 I 0.715
SapurV1A.0327s0220 Salix purpurea SapurV1A.0327s0220 I 0.715
Aquca_043_00039 Aquilegia coerulea Aquca_043_00039 I 0.714
Gorai.008G075600 Gossypium raimondii Gorai.008G075600 I 0.714
Pavir.Aa02595 Panicum virgatum Pavir.Aa02595 I 0.714
Cucsa.101370 Cucumis sativus Cucsa.101370 I 0.713
Cla008608 Citrullus lanatus Cla008608 I 0.712
Pavir.Fa00656 Panicum virgatum Pavir.Fa00656 I 0.711
OB08G25030 Oryza brachyantha OB08G25030 I 0.711
GRMZM2G369472 Zea mays GRMZM2G369472 I 0.710
Sb07g023030 Sorghum bicolor Sb07g023030 I 0.710
Eucgr.I00292 Eucalyptus grandis Eucgr.I00292 I 0.709
Thhalv10015583m.g Eutrema salsugineum Thhalv10015583m.g I 0.708
fgenesh2_kg.6__690__AT5G07310.1 Arabidopsis lyrata fgenesh2_kg.6__690__AT5G07310.1 I 0.708
ERF115 Arabidopsis thaliana AT5G07310 D 0.708
Bo9g175390 Brassica oleracea Bo9g175390 I 0.708
Ca_21773 Cicer arietinum Ca_21773 I 0.708
Carubv10002723m.g Capsella rubella Carubv10002723m.g I 0.708
Cagra.2662s0009 Capsella grandiflora Cagra.2662s0009 I 0.708
POPTR_0007s07090 Populus trichocarpa POPTR_0007s07090 I 0.708
Bostr.13129s0235 Boechera stricta Bostr.13129s0235 I 0.708
Bra009272 Brassica rapa Bra009272 I 0.708
Bo7g048170 Brassica oleracea Bo7g048170 I 0.708
Bra030095 Brassica rapa Bra030095 I 0.708
Cla007885 Citrullus lanatus Cla007885 I 0.707
GLYMA06G15341 Glycine max GLYMA06G15341 I 0.707
Bo2g008570 Brassica oleracea Bo2g008570 I 0.707
cassava19959.m1 Manihot esculenta cassava19959.m1 I 0.706
GLYMA06G17180 Glycine max GLYMA06G17180 I 0.706
SapurV1A.0517s0130 Salix purpurea SapurV1A.0517s0130 I 0.706
POPTR_0012s11030 Populus trichocarpa POPTR_0012s11030 I 0.706
TCM_014762 Theobroma cacao TCM_014762 I 0.706
gene06407-v1.0-hybrid Fragaria vesca gene06407-v1.0-hybrid I 0.706
chr1.CM0094.670.nd Lotus japonicus chr1.CM0094.670.nd I 0.706
AMTR_s00017p00232330 Amborella trichopoda AMTR_s00017p00232330 I 0.705
Bra005932 Brassica rapa Bra005932 I 0.705
Ciclev10018158m.g Citrus clementina Ciclev10018158m.g I 0.705
LPERR08G14810 Leersia perrieri LPERR08G14810 I 0.704
Aquca_023_00168 Aquilegia coerulea Aquca_023_00168 I 0.704
MTR_3g098580 Medicago truncatula MTR_3g098580 I 0.704
Ca_01387 Cicer arietinum Ca_01387 I 0.704
gene06406-v1.0-hybrid Fragaria vesca gene06406-v1.0-hybrid I 0.704
PRUPE_ppa008772mg Prunus persica PRUPE_ppa008772mg I 0.703
Bo3g004290 Brassica oleracea Bo3g004290 I 0.703
LPERR11G03740 Leersia perrieri LPERR11G03740 I 0.702
MDP0000894895 Malus domestica MDP0000894895 I 0.702
Gorai.008G210600 Gossypium raimondii Gorai.008G210600 I 0.701
OPUNC04G22340 Oryza punctata OPUNC04G22340 I 0.701
Pm024604 Prunus mume Pm024604 I 0.701
GSMUA_Achr6G18020_001 Musa acuminata GSMUA_Achr6G18020_001 I 0.701
ABR1 Vitis vinifera VIT_07s0031g01980 I 0.701
Bo3g143350 Brassica oleracea Bo3g143350 I 0.700
Bra010880 Brassica rapa Bra010880 I 0.700
Cucsa.250290 Cucumis sativus Cucsa.250290 I 0.699
chr4.CM0227.40.nd Lotus japonicus chr4.CM0227.40.nd I 0.699
Pavir.Ga00485 Panicum virgatum Pavir.Ga00485 I 0.698
BGIOSGA017088 Oryza indica BGIOSGA017088 I 0.698
GRMZM2G438202 Zea mays GRMZM2G438202 I 0.698
OGLUM04G24780 Oryza glumaepatula OGLUM04G24780 I 0.698
LPERR04G20430 Leersia perrieri LPERR04G20430 I 0.698
OBART04G25320 Oryza barthii OBART04G25320 I 0.698
OS04G0610400 Oryza sativa OS04G0610400 I 0.698
Si010228m.g Setaria italica Si010228m.g I 0.698
OMERI04G20480 Oryza meridionalis OMERI04G20480 I 0.698
ORUFI04G26530 Oryza rufipogon ORUFI04G26530 I 0.698
ORGLA04G0219400 Oryza glaberrima ORGLA04G0219400 I 0.698
ONIVA04G24000 Oryza nivara ONIVA04G24000 I 0.698
GRMZM2G068967 Zea mays GRMZM2G068967 I 0.698
Sb06g028090 Sorghum bicolor Sb06g028090 I 0.698
TCM_001301 Theobroma cacao TCM_001301 I 0.697
ERF110 Arabidopsis thaliana AT5G50080 I 0.697
ERF110 Arabidopsis lyrata fgenesh2_kg.8__881__AT5G50080.1 I 0.697
LPERR09G09240 Leersia perrieri LPERR09G09240 I 0.695
Lus10006796.g Linum usitatissimum Lus10006796.g I 0.695
Lus10005805.g Linum usitatissimum Lus10005805.g I 0.695
PGSC0003DMG400019693 Solanum tuberosum PGSC0003DMG400019693 I 0.692
OB09G19290 Oryza brachyantha OB09G19290 I 0.692
OMERI09G10200 Oryza meridionalis OMERI09G10200 I 0.692
OPUNC09G11150 Oryza punctata OPUNC09G11150 I 0.692
Pm026408 Prunus mume Pm026408 I 0.691
GSMUA_Achr7G18930_001 Musa acuminata GSMUA_Achr7G18930_001 I 0.691
Solyc04g051360.2 Solanum lycopersicum Solyc04g051360.2 I 0.690
BRADI5G21250 Brachypodium distachyon BRADI5G21250 I 0.689
Bra021594 Brassica rapa Bra021594 I 0.689
Gorai.007G045100 Gossypium raimondii Gorai.007G045100 I 0.689
e_gw1.31.217.1 Physcomitrella patens e_gw1.31.217.1 I 0.689
gene24044-v1.0-hybrid Fragaria vesca gene24044-v1.0-hybrid I 0.689
MDP0000254227 Malus domestica MDP0000254227 I 0.687
SELMODRAFT_87463 Selaginella moellendorffii SELMODRAFT_87463 I 0.686
evm.TU.supercontig_72.47 Carica papaya evm.TU.supercontig_72.47 I 0.686
SELMODRAFT_73854 Selaginella moellendorffii SELMODRAFT_73854 I 0.686
SapurV1A.3099s0010 Salix purpurea SapurV1A.3099s0010 I 0.686
MTR_4g086190 Medicago truncatula MTR_4g086190 I 0.685
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.685
Pavir.J02402 Panicum virgatum Pavir.J02402 I 0.685
Pavir.Gb00545 Panicum virgatum Pavir.Gb00545 I 0.685
MTR_4g086160 Medicago truncatula MTR_4g086160 I 0.685
MTR_4g086165 Medicago truncatula MTR_4g086165 I 0.685
gw1.136.88.1 Physcomitrella patens gw1.136.88.1 I 0.684
Bra019622 Brassica rapa Bra019622 I 0.684
cassava14079.valid.m1 Manihot esculenta cassava14079.valid.m1 I 0.684
27965.m000108 Ricinus communis 27965.m000108 I 0.684
Pavir.J19559 Panicum virgatum Pavir.J19559 I 0.683
SapurV1A.0627s0010 Salix purpurea SapurV1A.0627s0010 I 0.683
SapurV1A.0471s0080 Salix purpurea SapurV1A.0471s0080 I 0.683
SapurV1A.0787s0040 Salix purpurea SapurV1A.0787s0040 I 0.683
Bostr.15774s0146 Boechera stricta Bostr.15774s0146 I 0.682
Cagra.0301s0013 Capsella grandiflora Cagra.0301s0013 I 0.682
e_gw1.117.76.1 Physcomitrella patens e_gw1.117.76.1 I 0.682
GSMUA_Achr3G06960_001 Musa acuminata GSMUA_Achr3G06960_001 I 0.682
Carubv10025511m.g Capsella rubella Carubv10025511m.g I 0.682
MTR_4g086220 Medicago truncatula MTR_4g086220 I 0.681
POPTR_0005s08940 Populus trichocarpa POPTR_0005s08940 I 0.681
cassava21882.m1 Manihot esculenta cassava21882.m1 I 0.680
GSMUA_Achr3G15550_001 Musa acuminata GSMUA_Achr3G15550_001 I 0.680
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I 0.680
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I 0.680
Bo1g129710 Brassica oleracea Bo1g129710 I 0.679
Eucgr.G01970 Eucalyptus grandis Eucgr.G01970 I 0.679
POPTR_0007s11080 Populus trichocarpa POPTR_0007s11080 I 0.678
Ca_20968 Cicer arietinum Ca_20968 I 0.678
GSMUA_Achr8G08000_001 Musa acuminata GSMUA_Achr8G08000_001 I 0.678
mgf021642m Mimulus guttatus mgf021642m I 0.677
TCM_000606 Theobroma cacao TCM_000606 I 0.677