VIT_08s0007g03790 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_08s0007g03790 T006068_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.679 0.735
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.679 0.735
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_08s0007g03790.t01 AP2 58 108

Links

Other AP2 family TFs
Other Vitis vinifera TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Eucgr.K02069 Eucalyptus grandis Eucgr.K02069 N 0.702
Ca_20127 Cicer arietinum Ca_20127 N 0.682
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.679
Bo9g104770 Brassica oleracea Bo9g104770 I 0.679
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.679
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.679
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.679
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.679
DREB1D Arabidopsis thaliana AT5G51990 D 0.679
Bra028290 Brassica rapa Bra028290 I 0.679