VIT_14s0006g02290 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_14s0006g02290 T006101_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TINY
M01094_2.00 		Arabidopsis thaliana
NHRCCGACAN
NTGTCGGYDN		 PBM
Lambert et al.(2019)
pTH11541 		0.707 0.780
TINY
M06669_2.00 		Arabidopsis thaliana
HNYCRCCGACANHDN
NHDNTGTCGGYGRND		 Dap-seq
OMalley et al.(2016)
TINY_col_a 		0.707 0.780
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.685 0.740
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.685 0.740
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.681 0.740
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.681 0.740
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.681 0.740
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.678 0.740
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.678 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_14s0006g02290.t01 AP2 71 122

Links

Other AP2 family TFs
Other Vitis vinifera TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc08g066660.1 Solanum lycopersicum Solyc08g066660.1 I 0.772
PGSC0003DMG400002235 Solanum tuberosum PGSC0003DMG400002235 I 0.772
Cucsa.161310 Cucumis sativus Cucsa.161310 I 0.754
Cla022553 Citrullus lanatus Cla022553 I 0.754
29794.m003381 Ricinus communis 29794.m003381 I 0.750
VIT_04s0008g03400 Vitis vinifera VIT_04s0008g03400 I 0.750
VIT_00s0341g00070 Vitis vinifera VIT_00s0341g00070 I 0.750
PRUPE_ppa009533mg Prunus persica PRUPE_ppa009533mg I 0.750
TCM_037194 Theobroma cacao TCM_037194 I 0.750
cassava17185.m1 Manihot esculenta cassava17185.m1 I 0.750
VIT_00s0632g00010 Vitis vinifera VIT_00s0632g00010 I 0.750
cassava18256.valid.m1 Manihot esculenta cassava18256.valid.m1 I 0.750
orange1.1g027107m.g Citrus sinensis orange1.1g027107m.g I 0.750
SapurV1A.0291s0070 Salix purpurea SapurV1A.0291s0070 I 0.750
PK28082.1 Cannabis sativa PK28082.1 I 0.750
MDP0000242611 Malus domestica MDP0000242611 I 0.750
MDP0000241650 Malus domestica MDP0000241650 I 0.750
Ciclev10009370m.g Citrus clementina Ciclev10009370m.g I 0.750
gene08838-v1.0-hybrid Fragaria vesca gene08838-v1.0-hybrid I 0.750
Gorai.010G106600 Gossypium raimondii Gorai.010G106600 I 0.750
GLYMA14G22740 Glycine max GLYMA14G22740 I 0.750
Pm005151 Prunus mume Pm005151 I 0.750
MTR_3g110205 Medicago truncatula MTR_3g110205 I 0.748
GLYMA03G27050 Glycine max GLYMA03G27050 I 0.748
Thhalv10015895m.g Eutrema salsugineum Thhalv10015895m.g I 0.748
Eucgr.C00546 Eucalyptus grandis Eucgr.C00546 I 0.748
GLYMA07G14560 Glycine max GLYMA07G14560 I 0.748
DREB3 Arabidopsis thaliana AT5G11590 I 0.747
TINY2 Arabidopsis lyrata fgenesh2_kg.6__1130__AT5G11590.1 I 0.747
AMTR_s00056p00064760 Amborella trichopoda AMTR_s00056p00064760 I 0.747
Bra008952 Brassica rapa Bra008952 I 0.747
Bo9g170060 Brassica oleracea Bo9g170060 I 0.747
Bostr.20055s0079 Boechera stricta Bostr.20055s0079 I 0.747
Carubv10003136m.g Capsella rubella Carubv10003136m.g I 0.747
GLYMA06G08990 Glycine max GLYMA06G08990 I 0.745
GLYMA04G08901 Glycine max GLYMA04G08901 I 0.744
AMTR_s00111p00051610 Amborella trichopoda AMTR_s00111p00051610 I 0.741
GLYMA17G27520 Glycine max GLYMA17G27520 I 0.740
VIT_15s0021g02110 Vitis vinifera VIT_15s0021g02110 I 0.739
Eucgr.E01593 Eucalyptus grandis Eucgr.E01593 I 0.739
mgf024703m Mimulus guttatus mgf024703m I 0.737
Bo2g010530 Brassica oleracea Bo2g010530 I 0.737
Eucgr.C02928 Eucalyptus grandis Eucgr.C02928 I 0.735
Bra023332 Brassica rapa Bra023332 I 0.735
Gorai.004G289800 Gossypium raimondii Gorai.004G289800 I 0.732
chr1.CM0171.140.nc Lotus japonicus chr1.CM0171.140.nc I 0.727
Ca_14911 Cicer arietinum Ca_14911 I 0.726
Ca_01908 Cicer arietinum Ca_01908 I 0.724
evm.TU.supercontig_7.269 Carica papaya evm.TU.supercontig_7.269 I 0.724
Ca_28185 Cicer arietinum Ca_28185 I 0.724
gene25758-v1.0-hybrid Fragaria vesca gene25758-v1.0-hybrid I 0.724
MTR_1g006660 Medicago truncatula MTR_1g006660 I 0.723
MDP0000174352 Malus domestica MDP0000174352 I 0.722
PGSC0003DMG400018581 Solanum tuberosum PGSC0003DMG400018581 I 0.721
GSMUA_Achr10G21470_001 Musa acuminata GSMUA_Achr10G21470_001 I 0.721
GSMUA_Achr7G09450_001 Musa acuminata GSMUA_Achr7G09450_001 I 0.714
GLYMA15G02130 Glycine max GLYMA15G02130 I 0.712
GLYMA13G43210 Glycine max GLYMA13G43210 I 0.712
GSMUA_Achr1G01620_001 Musa acuminata GSMUA_Achr1G01620_001 I 0.711
Bostr.29827s0238 Boechera stricta Bostr.29827s0238 I 0.709
TINY Arabidopsis thaliana AT5G25810 D 0.707
Carubv10002601m.g Capsella rubella Carubv10002601m.g I 0.707
Bo7g095710 Brassica oleracea Bo7g095710 I 0.707
Bra009862 Brassica rapa Bra009862 I 0.707
Gorai.001G049800 Gossypium raimondii Gorai.001G049800 I 0.702
VIT_09s0002g03940 Vitis vinifera VIT_09s0002g03940 I 0.697
Ca_18948 Cicer arietinum Ca_18948 I 0.695
evm.TU.supercontig_89.73 Carica papaya evm.TU.supercontig_89.73 I 0.691
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I 0.691
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I 0.690
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I 0.690
Carubv10017799m.g Capsella rubella Carubv10017799m.g I 0.690
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I 0.690
TCM_028851 Theobroma cacao TCM_028851 I 0.688
Bra037041 Brassica rapa Bra037041 I 0.688
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I 0.688
Bra034535 Brassica rapa Bra034535 I 0.687
Bo3g171090 Brassica oleracea Bo3g171090 I 0.687
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.687
Bo7g115860 Brassica oleracea Bo7g115860 I 0.687
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I 0.687
Cla021417 Citrullus lanatus Cla021417 I 0.687
mgf022971m Mimulus guttatus mgf022971m I 0.687
Lus10038607.g Linum usitatissimum Lus10038607.g I 0.686
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I 0.685
ERF035 Arabidopsis thaliana AT3G60490 D 0.685
Lus10001601.g Linum usitatissimum Lus10001601.g I 0.685
Lus10002801.g Linum usitatissimum Lus10002801.g I 0.685
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I 0.685
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I 0.684
30146.m003535 Ricinus communis 30146.m003535 I 0.684
cassava33300.m1 Manihot esculenta cassava33300.m1 I 0.683
Gorai.003G175100 Gossypium raimondii Gorai.003G175100 I 0.681
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I 0.681
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I 0.681
cassava4979.m1 Manihot esculenta cassava4979.m1 I 0.681
30174.m008790 Ricinus communis 30174.m008790 I 0.681
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I 0.681
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I 0.681
ERF043 Arabidopsis thaliana AT4G32800 D 0.681
MDP0000790788 Malus domestica MDP0000790788 I 0.681
Carubv10006567m.g Capsella rubella Carubv10006567m.g I 0.681
Cucsa.259750 Cucumis sativus Cucsa.259750 I 0.680
TCM_005639 Theobroma cacao TCM_005639 I 0.680
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I 0.679
TCM_014892 Theobroma cacao TCM_014892 I 0.679
cassava19912.m1 Manihot esculenta cassava19912.m1 I 0.679
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I 0.679
cassava19875.m1 Manihot esculenta cassava19875.m1 I 0.679
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I 0.678
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I 0.678
Pm017610 Prunus mume Pm017610 I 0.678
PGSC0003DMG400026035 Solanum tuberosum PGSC0003DMG400026035 I 0.678
ERF034 Arabidopsis thaliana AT2G44940 D 0.678
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I 0.678
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I 0.678
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I 0.678
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I 0.678
Carubv10023699m.g Capsella rubella Carubv10023699m.g I 0.678
Solyc01g090560.2 Solanum lycopersicum Solyc01g090560.2 I 0.678
Solyc03g120840.1 Solanum lycopersicum Solyc03g120840.1 I 0.677
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I 0.677