VIT_15s0046g00310 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_15s0046g00310 T006113_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF023
M06560_2.00
Arabidopsis thaliana
DYCACCGACANHDNN

NNHDNTGTCGGTGRH
Dap-seq
OMalley et al.(2016)
AT1G01250_col_a
0.777 0.920
ERF023
M06561_2.00
Arabidopsis thaliana
HHNHHDHCACCGACA

TGTCGGTGDHDDNDD
Dap-seq
OMalley et al.(2016)
AT1G01250_colamp_a
0.777 0.920
ERF021
M06593_2.00
Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD

HGDCGGYGRHGRHGRHGRND
Dap-seq
OMalley et al.(2016)
AT1G71450_col_a
0.688 0.760
ERF021
M06594_2.00
Arabidopsis thaliana
NHNNCRCCGHCDH

DHGDCGGYGNNDN
Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a
0.688 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_15s0046g00310.t01 AP2 44 95

Links

Other AP2 family TFs
Other Vitis vinifera TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK15554.1 Cannabis sativa PK15554.1 I 0.803
chr1.LjT43L07.200.nd Lotus japonicus chr1.LjT43L07.200.nd I 0.803
SapurV1A.0003s1030 Salix purpurea SapurV1A.0003s1030 I 0.803
gene19141-v1.0-hybrid Fragaria vesca gene19141-v1.0-hybrid I 0.803
orange1.1g029627m.g Citrus sinensis orange1.1g029627m.g I 0.801
GLYMA19G44580 Glycine max GLYMA19G44580 I 0.801
Ciclev10022410m.g Citrus clementina Ciclev10022410m.g I 0.801
PRUPE_ppa026139mg Prunus persica PRUPE_ppa026139mg I 0.799
Pm018354 Prunus mume Pm018354 I 0.799
29742.m001400 Ricinus communis 29742.m001400 I 0.795
POPTR_0014s09540 Populus trichocarpa POPTR_0014s09540 I 0.795
MTR_7g117690 Medicago truncatula MTR_7g117690 I 0.795
GLYMA03G41910 Glycine max GLYMA03G41910 I 0.792
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I 0.791
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I 0.791
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I 0.791
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I 0.791
TCM_005130 Theobroma cacao TCM_005130 I 0.790
Gorai.008G126000 Gossypium raimondii Gorai.008G126000 I 0.790
mgf020568m Mimulus guttatus mgf020568m I 0.782
Ca_01325 Cicer arietinum Ca_01325 I 0.781
GLYMA16G02680 Glycine max GLYMA16G02680 I 0.779
ERF023 Arabidopsis thaliana AT1G01250 D 0.777
Cagra.1968s0069 Capsella grandiflora Cagra.1968s0069 I 0.777
Carubv10010347m.g Capsella rubella Carubv10010347m.g I 0.777
fgenesh2_kg.1__103__AT1G01250.1 Arabidopsis lyrata fgenesh2_kg.1__103__AT1G01250.1 I 0.777
Ca_17638 Cicer arietinum Ca_17638 I 0.775
Bra032630 Brassica rapa Bra032630 I 0.773
GLYMA07G06080 Glycine max GLYMA07G06080 I 0.771
Bostr.5325s0047 Boechera stricta Bostr.5325s0047 I 0.771
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.770
MTR_8g027465 Medicago truncatula MTR_8g027465 I 0.767
Bra033274 Brassica rapa Bra033274 I 0.764
Bo5g002600 Brassica oleracea Bo5g002600 I 0.764
Thhalv10009402m.g Eutrema salsugineum Thhalv10009402m.g I 0.764
Gorai.007G109400 Gossypium raimondii Gorai.007G109400 I 0.761
Bo8g117810 Brassica oleracea Bo8g117810 I 0.760
cassava43608.valid.m1 Manihot esculenta cassava43608.valid.m1 I 0.751
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.714
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.712
Cla012665 Citrullus lanatus Cla012665 I 0.710
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.710
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.702
TCM_036269 Theobroma cacao TCM_036269 I 0.702
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.701
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.701
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.701
Bra016136 Brassica rapa Bra016136 I 0.700
Bo6g113020 Brassica oleracea Bo6g113020 I 0.693
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.692
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.691
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.689
Cla012661 Citrullus lanatus Cla012661 I 0.688
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.688
ERF021 Arabidopsis thaliana AT1G71450 D 0.688
Bo2g072910 Brassica oleracea Bo2g072910 I 0.688
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.688
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.688
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.688
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.687
MDP0000283350 Malus domestica MDP0000283350 I 0.687
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.685
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.685
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.683
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.683
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.683
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.682
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.678
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.678
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.678
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.678
Ca_15064 Cicer arietinum Ca_15064 I 0.677
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.677