VIT_16s0100g00400 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_16s0100g00400 T006130_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G63040
M06590_2.00 		Arabidopsis thaliana
TTGAAA
TTTCAA		 Dap-seq
OMalley et al.(2016)
AT1G63040_col_a 		0.679 0.857
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_16s0100g00400.t01 AP2 71 121

Links

Other AP2 family TFs
Other Vitis vinifera TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10023678m.g Eutrema salsugineum Thhalv10023678m.g I 0.750
Pm023766 Prunus mume Pm023766 I 0.735
PRUPE_ppa026499mg Prunus persica PRUPE_ppa026499mg I 0.735
gene32380-v1.0-hybrid Fragaria vesca gene32380-v1.0-hybrid N 0.731
Cucsa.041590 Cucumis sativus Cucsa.041590 N 0.730
MDP0000400129 Malus domestica MDP0000400129 N 0.727
POPTR_0001s08740 Populus trichocarpa POPTR_0001s08740 N 0.718
SapurV1A.0282s0060 Salix purpurea SapurV1A.0282s0060 N 0.717
Pm023767 Prunus mume Pm023767 N 0.717
PRUPE_ppa021384mg Prunus persica PRUPE_ppa021384mg N 0.717
PRUPE_ppa022712mg Prunus persica PRUPE_ppa022712mg N 0.716
Pm023768 Prunus mume Pm023768 N 0.716
GLYMA01G42510 Glycine max GLYMA01G42510 N 0.702
chr2.CM0304.660.nd Lotus japonicus chr2.CM0304.660.nd N 0.697
Aquca_013_00433 Aquilegia coerulea Aquca_013_00433 I 0.687
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.683
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.682
TCM_016176 Theobroma cacao TCM_016176 I 0.682
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.682
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.680
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.679
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.677
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.677
Cla011673 Citrullus lanatus Cla011673 I 0.677