CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NCLIV_034610
(
Neospora caninum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
NCLIV_034610
T006206_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PFD0985w
M00578_2.00
Plasmodium falciparum
AYACACAY
RTGTGTRT
PBM
Campbell et al.(2010)
PFD0985w_D1
0.702
0.660
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCLIV_034610
AP2
3282
3335
LPTGVYFDVARRLWRCQWREDGRLKSSGFSLKHYKTLEAARAACILYKCAMTNT
Links
Other
AP2
family TFs
Other
Neospora caninum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy