CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_05803
(
Cicer arietinum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Ca_05803
T006294_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC
GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.700
0.796
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN
NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.687
0.755
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_05803
AP2
68
119
KKFRGVRQRPWGKWSAEIRDPLRRVRRWLGTYNTAEEAAIQYDKAAIEIRGE
Links
Other
AP2
family TFs
Other
Cicer arietinum
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0013s15440
Populus trichocarpa
POPTR_0013s15440
I
0.750
Solyc01g095500.2
Solanum lycopersicum
Solyc01g095500.2
I
0.749
PGSC0003DMG400000091
Solanum tuberosum
PGSC0003DMG400000091
I
0.741
Gorai.003G082200
Gossypium raimondii
Gorai.003G082200
I
0.724
MTR_8g099215
Medicago truncatula
MTR_8g099215
I
0.719
Cla011108
Citrullus lanatus
Cla011108
I
0.709
chr2.CM0060.150.nc
Lotus japonicus
chr2.CM0060.150.nc
I
0.709
Cucsa.107190
Cucumis sativus
Cucsa.107190
I
0.709
Bra019270
Brassica rapa
Bra019270
I
0.709
Bo7g109100
Brassica oleracea
Bo7g109100
I
0.709
Bra013730
Brassica rapa
Bra013730
I
0.709
Bo1g037170
Brassica oleracea
Bo1g037170
I
0.709
Thhalv10026857m.g
Eutrema salsugineum
Thhalv10026857m.g
I
0.708
gene18922-v1.0-hybrid
Fragaria vesca
gene18922-v1.0-hybrid
I
0.703
Carubv10005160m.g
Capsella rubella
Carubv10005160m.g
I
0.702
Cagra.1226s0039
Capsella grandiflora
Cagra.1226s0039
I
0.702
CRF2
Arabidopsis lyrata
fgenesh2_kg.7__1924__AT4G23750.1
I
0.702
Bostr.7867s0178
Boechera stricta
Bostr.7867s0178
I
0.702
CRF2
Arabidopsis thaliana
AT4G23750
D
0.702
GSMUA_Achr7G18930_001
Musa acuminata
GSMUA_Achr7G18930_001
I
0.700
Lus10033938.g
Linum usitatissimum
Lus10033938.g
I
0.699
Lus10032353.g
Linum usitatissimum
Lus10032353.g
I
0.699
30190.m010791
Ricinus communis
30190.m010791
I
0.698
GLYMA05G37120
Glycine max
GLYMA05G37120
I
0.697
GLYMA08G02460
Glycine max
GLYMA08G02460
I
0.697
Thhalv10029132m.g
Eutrema salsugineum
Thhalv10029132m.g
I
0.696
Bo3g045150
Brassica oleracea
Bo3g045150
I
0.696
gene24044-v1.0-hybrid
Fragaria vesca
gene24044-v1.0-hybrid
I
0.696
Bostr.25463s0212
Boechera stricta
Bostr.25463s0212
I
0.696
Carubv10001539m.g
Capsella rubella
Carubv10001539m.g
I
0.695
MDP0000229285
Malus domestica
MDP0000229285
I
0.694
CRF1
Arabidopsis lyrata
fgenesh2_kg.6__3086__AT4G11140.1
I
0.694
30169.m006542
Ricinus communis
30169.m006542
I
0.694
MDP0000783818
Malus domestica
MDP0000783818
I
0.694
CRF1
Arabidopsis thaliana
AT4G11140
I
0.694
Cucsa.303720
Cucumis sativus
Cucsa.303720
I
0.693
POPTR_0001s10300
Populus trichocarpa
POPTR_0001s10300
I
0.693
TCM_016396
Theobroma cacao
TCM_016396
I
0.693
Ciclev10021073m.g
Citrus clementina
Ciclev10021073m.g
I
0.693
Cla011573
Citrullus lanatus
Cla011573
I
0.693
Cla004291
Citrullus lanatus
Cla004291
I
0.693
PRUPE_ppa025804mg
Prunus persica
PRUPE_ppa025804mg
I
0.693
Pm024096
Prunus mume
Pm024096
I
0.693
POPTR_0003s13610
Populus trichocarpa
POPTR_0003s13610
I
0.693
Gorai.008G252300
Gossypium raimondii
Gorai.008G252300
I
0.693
Cucsa.012850
Cucumis sativus
Cucsa.012850
I
0.693
cassava39307.m1
Manihot esculenta
cassava39307.m1
I
0.693
orange1.1g036154m.g
Citrus sinensis
orange1.1g036154m.g
I
0.693
PK16787.1
Cannabis sativa
PK16787.1
I
0.693
SapurV1A.0237s0040
Salix purpurea
SapurV1A.0237s0040
I
0.693
cassava12291.valid.m1
Manihot esculenta
cassava12291.valid.m1
I
0.693
mgf008137m
Mimulus guttatus
mgf008137m
I
0.693
Gorai.004G135700
Gossypium raimondii
Gorai.004G135700
I
0.693
Gorai.006G208200
Gossypium raimondii
Gorai.006G208200
I
0.693
GLYMA11G02140
Glycine max
GLYMA11G02140
I
0.692
Eucgr.I01153
Eucalyptus grandis
Eucgr.I01153
I
0.692
evm.TU.supercontig_122.27
Carica papaya
evm.TU.supercontig_122.27
I
0.692
mgf018116m
Mimulus guttatus
mgf018116m
I
0.691
Solyc08g081960.1
Solanum lycopersicum
Solyc08g081960.1
I
0.691
PK28823.1
Cannabis sativa
PK28823.1
I
0.691
PGSC0003DMG400012305
Solanum tuberosum
PGSC0003DMG400012305
I
0.691
Cucsa.252810
Cucumis sativus
Cucsa.252810
I
0.690
VIT_16s0050g02400
Vitis vinifera
VIT_16s0050g02400
I
0.690
cassava7228.valid.m1
Manihot esculenta
cassava7228.valid.m1
I
0.690
PGSC0003DMG400002350
Solanum tuberosum
PGSC0003DMG400002350
I
0.690
Gorai.008G271200
Gossypium raimondii
Gorai.008G271200
I
0.690
GLYMA01G43350
Glycine max
GLYMA01G43350
I
0.690
BRADI3G38140
Brachypodium distachyon
BRADI3G38140
I
0.690
LjSGA_008718.1
Lotus japonicus
LjSGA_008718.1
I
0.690
PGSC0003DMG400036493
Solanum tuberosum
PGSC0003DMG400036493
I
0.690
Gorai.006G200400
Gossypium raimondii
Gorai.006G200400
I
0.690
Eucgr.K00321
Eucalyptus grandis
Eucgr.K00321
I
0.690
TCM_015336
Theobroma cacao
TCM_015336
I
0.690
Solyc06g051840.1
Solanum lycopersicum
Solyc06g051840.1
I
0.690
Solyc03g007460.1
Solanum lycopersicum
Solyc03g007460.1
I
0.690
Si014237m.g
Setaria italica
Si014237m.g
I
0.690
OS05G0316800
Oryza sativa
OS05G0316800
N
0.689
SapurV1A.0013s0740
Salix purpurea
SapurV1A.0013s0740
I
0.689
BGIOSGA019608
Oryza indica
BGIOSGA019608
N
0.689
POPTR_0014s09020
Populus trichocarpa
POPTR_0014s09020
I
0.689
ONIVA05G11840
Oryza nivara
ONIVA05G11840
N
0.689
OMERI05G10040
Oryza meridionalis
OMERI05G10040
N
0.689
ORUFI05G12300
Oryza rufipogon
ORUFI05G12300
N
0.689
Lus10027573.g
Linum usitatissimum
Lus10027573.g
I
0.688
mgf023807m
Mimulus guttatus
mgf023807m
I
0.688
Ciclev10028930m.g
Citrus clementina
Ciclev10028930m.g
I
0.688
Lus10039324.g
Linum usitatissimum
Lus10039324.g
I
0.688
Pm026408
Prunus mume
Pm026408
I
0.688
AMTR_s00097p00165740
Amborella trichopoda
AMTR_s00097p00165740
I
0.688
GRMZM2G369472
Zea mays
GRMZM2G369472
I
0.688
GLYMA06G13040
Glycine max
GLYMA06G13040
I
0.688
Sb07g023030
Sorghum bicolor
Sb07g023030
I
0.688
GLYMA04G41740
Glycine max
GLYMA04G41740
I
0.688
ONIVA08G19930
Oryza nivara
ONIVA08G19930
I
0.687
OB08G25030
Oryza brachyantha
OB08G25030
I
0.687
OS08G0474000
Oryza sativa
OS08G0474000
I
0.687
OGLUM08G18720
Oryza glumaepatula
OGLUM08G18720
I
0.687
LOC_Os08g36920
Oryza sativa
LOC_Os08g36920
D
0.687
Pavir.Fa00656
Panicum virgatum
Pavir.Fa00656
I
0.687
OPUNC08G15760
Oryza punctata
OPUNC08G15760
I
0.687
Lus10026053.g
Linum usitatissimum
Lus10026053.g
N
0.687
OLONG_013554
Oryza longistaminata
OLONG_013554
I
0.687
Thhalv10023946m.g
Eutrema salsugineum
Thhalv10023946m.g
I
0.686
Ciclev10005220m.g
Citrus clementina
Ciclev10005220m.g
I
0.686
orange1.1g047455m.g
Citrus sinensis
orange1.1g047455m.g
I
0.686
mgf022434m
Mimulus guttatus
mgf022434m
I
0.686
POPTR_0012s01260
Populus trichocarpa
POPTR_0012s01260
I
0.685
Ca_03948
Cicer arietinum
Ca_03948
I
0.685
SapurV1A.0035s0790
Salix purpurea
SapurV1A.0035s0790
I
0.685
cassava2923.m1
Manihot esculenta
cassava2923.m1
N
0.685
MTR_3g090760
Medicago truncatula
MTR_3g090760
I
0.685
MTR_4g086160
Medicago truncatula
MTR_4g086160
I
0.684
MTR_4g086190
Medicago truncatula
MTR_4g086190
I
0.684
Gorai.013G043700
Gossypium raimondii
Gorai.013G043700
I
0.684
Lus10014345.g
Linum usitatissimum
Lus10014345.g
N
0.684
Gorai.008G025100
Gossypium raimondii
Gorai.008G025100
I
0.684
Pm019793
Prunus mume
Pm019793
I
0.684
TCM_007061
Theobroma cacao
TCM_007061
I
0.684
Eucgr.A02669
Eucalyptus grandis
Eucgr.A02669
I
0.684
Ca_15671
Cicer arietinum
Ca_15671
I
0.684
PRUPE_ppa008720mg
Prunus persica
PRUPE_ppa008720mg
I
0.684
Aquca_037_00045
Aquilegia coerulea
Aquca_037_00045
I
0.684
cassava38228.valid.m1
Manihot esculenta
cassava38228.valid.m1
I
0.684
Gorai.005G238000
Gossypium raimondii
Gorai.005G238000
I
0.684
GLYMA03G23330
Glycine max
GLYMA03G23330
I
0.683
MDP0000254227
Malus domestica
MDP0000254227
I
0.683
MTR_4g086165
Medicago truncatula
MTR_4g086165
I
0.683
GLYMA16G08683
Glycine max
GLYMA16G08683
I
0.683
28049.m000300
Ricinus communis
28049.m000300
I
0.682
cassava32471.m1
Manihot esculenta
cassava32471.m1
I
0.682
GLYMA14G29040
Glycine max
GLYMA14G29040
I
0.680
Cla022096
Citrullus lanatus
Cla022096
I
0.680
MTR_4g086220
Medicago truncatula
MTR_4g086220
I
0.680
Gorai.007G105600
Gossypium raimondii
Gorai.007G105600
I
0.680
gene13118-v1.0-hybrid
Fragaria vesca
gene13118-v1.0-hybrid
I
0.680
gw1.259.19.1
Physcomitrella patens
gw1.259.19.1
I
0.679
POPTR_0002s16900
Populus trichocarpa
POPTR_0002s16900
I
0.679
GLYMA13G08490
Glycine max
GLYMA13G08490
I
0.679
VIT_06s0004g08190
Vitis vinifera
VIT_06s0004g08190
I
0.679
Bra008460
Brassica rapa
Bra008460
N
0.678
Cagra.16778s0005
Capsella grandiflora
Cagra.16778s0005
I
0.678
SapurV1A.0099s0060
Salix purpurea
SapurV1A.0099s0060
I
0.678
gene28067-v1.0-hybrid
Fragaria vesca
gene28067-v1.0-hybrid
I
0.678
SapurV1A.2151s0020
Salix purpurea
SapurV1A.2151s0020
I
0.677
SapurV1A.1043s0120
Salix purpurea
SapurV1A.1043s0120
I
0.677
SapurV1A.1442s0010
Salix purpurea
SapurV1A.1442s0010
I
0.677
evm.TU.supercontig_62.11
Carica papaya
evm.TU.supercontig_62.11
I
0.677