Cla001755 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla001755 T006405_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.722 0.898
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.708 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla001755 AP2 124 175

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.813
MDP0000446783 Malus domestica MDP0000446783 I 0.769
MDP0000147009 Malus domestica MDP0000147009 I 0.769
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.766
Pm015262 Prunus mume Pm015262 I 0.765
MDP0000165880 Malus domestica MDP0000165880 I 0.765
Pm018989 Prunus mume Pm018989 I 0.763
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.763
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.756
PK16401.1 Cannabis sativa PK16401.1 N 0.755
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.740
MDP0000290585 Malus domestica MDP0000290585 I 0.739
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.738
TCM_043306 Theobroma cacao TCM_043306 I 0.734
TCM_043302 Theobroma cacao TCM_043302 I 0.734
TCM_043275 Theobroma cacao TCM_043275 I 0.732
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.728
PK07402.1 Cannabis sativa PK07402.1 D 0.722
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.722
Cla006713 Citrullus lanatus Cla006713 I 0.721
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.720
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.718
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.717
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.717
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.717
F775_32062 Aegilops tauschii F775_32062 I 0.717
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.716
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.715
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.713
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.712
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.712
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.711
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.710
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.710
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.710
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.708
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.708
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.708
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.708
Si022619m.g Setaria italica Si022619m.g I 0.704
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.703
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.702
29729.m002292 Ricinus communis 29729.m002292 I 0.701
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.700
TCM_026121 Theobroma cacao TCM_026121 I 0.700
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.700
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.697
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.697
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.695
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.695
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.694
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.692
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.691
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.691
Bra017011 Brassica rapa Bra017011 I 0.688
Bo4g190040 Brassica oleracea Bo4g190040 I 0.688
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.687
F775_02345 Aegilops tauschii F775_02345 I 0.685
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.685
Si024059m.g Setaria italica Si024059m.g I 0.685
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.685
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.685
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.685
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.684
DREB2C Oryza sativa OS08G0565200 I 0.684
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.684
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.684
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.684
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.684
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.684
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.684
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.684
OB08G30790 Oryza brachyantha OB08G30790 I 0.684
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.683
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.683
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.683
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.683
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.683
Ca_22585 Cicer arietinum Ca_22585 I 0.681
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.680
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.680
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.680
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.678
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.677
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.677