Cla005054 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla005054 T006421_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla005054 AP2 16 67

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.780
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.749
TCM_015579 Theobroma cacao TCM_015579 I 0.749
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.749
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.749
30068.m002623 Ricinus communis 30068.m002623 I 0.743
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.734
PK25269.1 Cannabis sativa PK25269.1 I 0.733
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.725
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.724
MDP0000138669 Malus domestica MDP0000138669 I 0.722
MDP0000133476 Malus domestica MDP0000133476 I 0.722
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.722
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.722
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.722
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.722
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.722
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.722
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.722
Pm008788 Prunus mume Pm008788 I 0.722
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.722
mgf018851m Mimulus guttatus mgf018851m I 0.722
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.722
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.722
TCM_005425 Theobroma cacao TCM_005425 I 0.722
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.721
Si032213m.g Setaria italica Si032213m.g I 0.721
Ca_16397 Cicer arietinum Ca_16397 I 0.720
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.720
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.720
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.720
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.719
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.719
30174.m008961 Ricinus communis 30174.m008961 I 0.718
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.716
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.716
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.716
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.715
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.715
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.715
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.715
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.711
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.711
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.711
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.709
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.709
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.707
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.706
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.706
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.706
Ca_25424 Cicer arietinum Ca_25424 I 0.706
MDP0000127123 Malus domestica MDP0000127123 N 0.706
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.705
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.705
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.704
MDP0000316843 Malus domestica MDP0000316843 N 0.700
GLYMA20G03890 Glycine max GLYMA20G03890 N 0.700
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.696
Cla021590 Citrullus lanatus Cla021590 I 0.696
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.695
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.695
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.695
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.692
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.691
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.691
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.689
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.689
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.687
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.687
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.687
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.687
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.687
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.687
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.687
Cla010474 Citrullus lanatus Cla010474 I 0.687
Si024417m.g Setaria italica Si024417m.g I 0.687
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.687
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.687
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.687
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.687
Ca_00417 Cicer arietinum Ca_00417 I 0.686
TCM_011632 Theobroma cacao TCM_011632 I 0.685
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.685
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.685
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.684
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.684
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.684
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.684
Ca_10494 Cicer arietinum Ca_10494 I 0.684
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.684
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.684
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.684
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.684
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.684
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.684
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.684
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.684
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.684
MDP0000551969 Malus domestica MDP0000551969 I 0.684
OBART12G17080 Oryza barthii OBART12G17080 I 0.684
MDP0000276536 Malus domestica MDP0000276536 I 0.684
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.684
OS12G0582900 Oryza sativa OS12G0582900 I 0.684
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.684
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.684
Si038848m.g Setaria italica Si038848m.g I 0.684
TCM_018659 Theobroma cacao TCM_018659 I 0.684
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.684
Pm015931 Prunus mume Pm015931 I 0.684
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.684
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.684
F775_02727 Aegilops tauschii F775_02727 I 0.684
PK13330.1 Cannabis sativa PK13330.1 I 0.684
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.684
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.684
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.684
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.684
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.684
29635.m000461 Ricinus communis 29635.m000461 I 0.684
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.684
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.684
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.684
29813.m001543 Ricinus communis 29813.m001543 I 0.682
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.682
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.682
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.682
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.682
OB09G23520 Oryza brachyantha OB09G23520 I 0.682
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.680
mgf024137m Mimulus guttatus mgf024137m N 0.679
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.678
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.678
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.677