Cla011108 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla011108 T006453_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.842 0.900
CRF3
M01633_2.00
Arabidopsis thaliana
NNGCCRNNN

NNNYGGCNN
PBM
Weirauch et al.(2014)
pTH8110
0.799 0.820
CRF4
M01626_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8261
0.793 0.800
CRF4
M06645_2.00
Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN

NRGHDDHDGYGGCGGCGGHKV
Dap-seq
OMalley et al.(2016)
CRF4_col_a
0.793 0.800
CRF4
M06646_2.00
Arabidopsis thaliana
YCDYCGCCGCCGYYD

HRRCGGCGGCGRHGR
Dap-seq
OMalley et al.(2016)
CRF4_colamp_a
0.793 0.800
ERF069
M01604_2.00
Arabidopsis thaliana
NNGCCGNNN

NNNCGGCNN
PBM
Weirauch et al.(2014)
pTH7550
0.766 0.800
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.759 0.740
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.749 0.760
A4F249_TOBAC
M09726_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF2_01
0.729 0.760
ERF091
M06638_2.00
Arabidopsis thaliana
NNHNYHDCCGCCGCCRY

RYGGCGGCGGHDRNDNN
Dap-seq
OMalley et al.(2016)
AT4G18450_col_a
0.718 0.720
A4F248_TOBAC
M09725_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF1_01
0.714 0.720
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN

NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.714 0.700
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH

DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.714 0.700
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD

HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.714 0.700
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.713 0.680
Q7Y1W2_TOBAC
M09735_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CEF1_01
0.712 0.680
ERF10
M06562_2.00
Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN

NRYGGCGGCGRHDDNDNNDNN
Dap-seq
OMalley et al.(2016)
ERF10_col_a
0.709 0.640
ERF10
M06563_2.00
Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN

NNNNNNHDDYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF10_colamp_a
0.709 0.640
ERF2_TOBAC
M09727_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF2_01
0.705 0.700
EREBP1
M09708_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EREBP1_01
0.701 0.680
RAP2-3
M01050_2.00
Arabidopsis thaliana
CGCCGCCR

YGGCGGCG
PBM
Sullivan et al.(2014)
pTH8811
0.693 0.720
RAP2-3
M00847_2.00
Arabidopsis thaliana
NMGCCGCCDN

NHGGCGGCKN
PBM
Franco-Zorrilla et al.(2014)
RAP2.3
0.693 0.720
RAP2-12
M01046_2.00
Arabidopsis thaliana
RSMGBMNNNN

NNNNKVCKSY
PBM
Sullivan et al.(2014)
pTH7359
0.690 0.640
RAP2-12
M06588_2.00
Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN

NDNNNDHDDYGGCGGCGGHDN
Dap-seq
OMalley et al.(2016)
RAP212_col_a
0.690 0.640
ERF5
M00721_2.00
Arabidopsis thaliana
NNNGSMRNMN

NKNYKSCNNN
PBM
Chang et al.(2013)
pTH7197
0.689 0.660
ERF5
M06674_2.00
Arabidopsis thaliana
YCDYCKCCGCCGYCD

HGRCGGCGGMGRHGR
Dap-seq
OMalley et al.(2016)
ERF5_col_a
0.689 0.660
ERF5
M06675_2.00
Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN

NNNHDNHDRYGGCGGCGVHDN
Dap-seq
OMalley et al.(2016)
ERF5_colamp_a
0.689 0.660
ERF5_TOBAC
M09729_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF4_02
0.688 0.660
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN

NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.687 0.640
ERF4
M01616_2.00
Arabidopsis thaliana
VCGCCGCC

GGCGGCGB
PBM
Weirauch et al.(2014)
pTH8156
0.687 0.620
ERF4
M06616_2.00
Arabidopsis thaliana
YCDCCGCCGCCRHHD

HDDYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF4_col_a
0.687 0.620
ERF4
M06617_2.00
Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN

NNHDDYGRCGGCGSNDNNDN
Dap-seq
OMalley et al.(2016)
ERF4_colamp_a
0.687 0.620
ERF4_TOBAC
M09728_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_02
0.687 0.640
ERF9
M06670_2.00
Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN

NDRHDRHDDHGRCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF9_col_a
0.682 0.640
ERF9
M06671_2.00
Arabidopsis thaliana
NNHDSCGCCGYCRHWDN

NHWDYGRCGGCGSHDNN
Dap-seq
OMalley et al.(2016)
ERF9_colamp_a
0.682 0.640
HRE1
M06595_2.00
Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN

NDDHDRYGGCGGCGGHKVNDN
Dap-seq
OMalley et al.(2016)
ERF73_col_a
0.681 0.620
HRE1
M06596_2.00
Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY

RYGGCGGCGGHGRNDKHDRND
Dap-seq
OMalley et al.(2016)
ERF73_colamp_a
0.681 0.620
PK19363.1
M01100_2.00
Cannabis sativa
NMGCCGHMNN

NNKDCGGCKN
PBM
Lambert et al.(2019)
pTH10138
0.681 0.620
PK19363.1
M01643_2.00
Cannabis sativa
CGCCGYCD

HGRCGGCG
PBM
Weirauch et al.(2014)
pTH9609
0.681 0.620
PK02330.1
M01095_2.00
Cannabis sativa
NNNGCCGBCN

NGVCGGCNNN
PBM
Lambert et al.(2019)
pTH10093
0.681 0.660
Q84J59_MAIZE
M09717_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BD1_01
0.679 0.560
Q5Y836_TOBAC
M09732_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF5_02
0.678 0.640
ERF104
M06682_2.00
Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH

DRYGGCGGCGGHKRHDDNN
Dap-seq
OMalley et al.(2016)
ERF104_col_a
0.677 0.660
ERF104
M06683_2.00
Arabidopsis thaliana
BHDSCGCCGCCRYHD

HDRYGGCGGCGSHDV
Dap-seq
OMalley et al.(2016)
ERF104_colamp_a
0.677 0.660
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla011108 AP2 105 156

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

1241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_056860 Acremonium chrysogenum ACRE_056860 I 0.000
ACRE_028290 Acremonium chrysogenum ACRE_028290 I 0.000
AB04817.1 Alternaria brassicicola AB04817.1 I 0.000
AOL_s00215g64 Arthrobotrys oligospora AOL_s00215g64 I 0.000
ARB_05352 Arthroderma benhamiae ARB_05352 I 0.000
MCYG_04996 Arthroderma otae MCYG_04996 I 0.000
fgenesh1_pm.00118_#_216 Aspergillus carbonarius fgenesh1_pm.00118_#_216 I 0.000
ACLA_082980 Aspergillus clavatus CADACLAG00007994 I 0.000
CADAFLAG00009992 Aspergillus flavus CADAFLAG00009992 I 0.000
AFUA_6G09930 Aspergillus fumigatus CADAFUAG00001764 I 0.000
ANIA_07513 Aspergillus nidulans CADANIAG00000615 D 0.000
CADANGAG00009121 Aspergillus niger CADANGAG00009121 I 0.000
CADAORAG00000572 Aspergillus oryzae CADAORAG00000572 I 0.000
EURHEDRAFT_405475 Aspergillus ruber EURHEDRAFT_405475 I 0.000
ATEG_06717 Aspergillus terreus CADATEAG00007654 I 0.000
M437DRAFT_88117 Aureobasidium melanogenum M437DRAFT_88117 I 0.000
M438DRAFT_337469 Aureobasidium pullulans M438DRAFT_337469 I 0.000
AUEXF2481DRAFT_35799 Aureobasidium subglaciale AUEXF2481DRAFT_35799 I 0.000
BAUCODRAFT_63784 Baudoinia compniacensis BAUCODRAFT_63784 I 0.000
BBA_03650 Beauveria bassiana BBA_03650 I 0.000
COCC4DRAFT_173684 Bipolaris maydis COCC4DRAFT_173684 I 0.000
COCMIDRAFT_100501 Bipolaris oryzae COCMIDRAFT_100501 I 0.000
COCSADRAFT_250469 Bipolaris sorokiniana COCSADRAFT_250469 I 0.000
COCVIDRAFT_105819 Bipolaris victoriae COCVIDRAFT_105819 I 0.000
COCCADRAFT_4209 Bipolaris zeicola COCCADRAFT_4209 I 0.000
BDDG_00438 Blastomyces dermatitidis BDDG_00438 I 0.000
BGHDH14_bgh00909 Blumeria graminis BGHDH14_bgh00909 I 0.000
Bcin13g03000 Botrytis cinerea Bcin13g03000 I 0.000
PVAR5_6135 Byssochlamys spectabilis PVAR5_6135 I 0.000
A1O1_03859 Capronia coronata A1O1_03859 I 0.000
A1O3_06529 Capronia epimyces A1O3_06529 I 0.000
PV04_10908 Capronia semiimmersa PV04_10908 I 0.000
CHGG_06554 Chaetomium globosum CHGG_06554 I 0.000
Z519_05838 Cladophialophora bantiana Z519_05838 I 0.000
G647_08434 Cladophialophora carrionii G647_08434 I 0.000
PV07_08431 Cladophialophora immunda PV07_08431 I 0.000
A1O5_07259 Cladophialophora psammophila A1O5_07259 I 0.000
A1O7_09850 Cladophialophora yegresii A1O7_09850 I 0.000
CPUR_01989 Claviceps purpurea CPUR_01989 I 0.000
CIMG_01382 Coccidioides immitis CIMG_01382 I 0.000
CPC735_050410 Coccidioides posadasii CPC735_050410 I 0.000
estExt_Genewise1Plus.C_130082 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_130082 I 0.000
CFIO01_11339 Colletotrichum fioriniae CFIO01_11339 I 0.000
CGGC5_5165 Colletotrichum gloeosporioides CGGC5_5165 I 0.000
GLRG_05388 Colletotrichum graminicola GLRG_05388 I 0.000
CH063_06068 Colletotrichum higginsianum CH063_06068 I 0.000
Cob_11788 Colletotrichum orbiculare Cob_11788 I 0.000
CSUB01_01966 Colletotrichum sublineola CSUB01_01966 I 0.000
W97_07866 Coniosporium apollinis W97_07866 I 0.000
CCM_09377 Cordyceps militaris CCM_09377 I 0.000
estExt_Genewise1Plus.C_90094 Cryphonectria parasitica estExt_Genewise1Plus.C_90094 I 0.000
HMPREF1541_05614 Cyphellophora europaea HMPREF1541_05614 I 0.000
H072_4550 Dactylellina haptotyla H072_4550 I 0.000
DOTSEDRAFT_67816 Dothistroma septosporum DOTSEDRAFT_67816 I 0.000
DRE_03900 Drechslerella stenobrocha DRE_03900 I 0.000
EPUS_04235 Endocarpon pusillum EPUS_04235 I 0.000
UCREL1_8518 Eutypa lata UCREL1_8518 I 0.000
A1O9_09618 Exophiala aquamarina A1O9_09618 I 0.000
HMPREF1120_08988 Exophiala dermatitidis HMPREF1120_08988 I 0.000
PV10_06508 Exophiala mesophila PV10_06508 I 0.000
PV06_06768 Exophiala oligosperma PV06_06768 I 0.000
PV11_05605 Exophiala sideris PV11_05605 I 0.000
PV08_07641 Exophiala spinifera PV08_07641 I 0.000
PV05_03710 Exophiala xenobiotica PV05_03710 I 0.000
Z517_08992 Fonsecaea pedrosoi Z517_08992 I 0.000
FFUJ_06324 Fusarium fujikuroi FFUJ_06324 I 0.000
FGRRES_08800 Fusarium graminearum FGRRES_08800 I 0.000
FOXG_02993 Fusarium oxysporum FOXG_02993 I 0.000
FPSE_11967 Fusarium pseudograminearum FPSE_11967 I 0.000
NechaG99622 Fusarium solani NechaG99622 I 0.000
NechaG67451 Fusarium solani NechaG67451 I 0.000
FVEG_01844 Fusarium verticillioides FVEG_01844 I 0.000
GGTG_00856 Gaeumannomyces graminis GGTG_00856 I 0.000
M7I_5161 Glarea lozoyensis M7I_5161 I 0.000
HCBG_05924 Histoplasma capsulatum HCBG_05924 I 0.000
LEMA_P070240.1 Leptosphaeria maculans LEMA_P070240.1 I 0.000
MPH_11343 Macrophomina phaseolina MPH_11343 I 0.000
MGG_12814 Magnaporthe oryzae MGG_12814 I 0.000
MGG_02632 Magnaporthe oryzae MGG_02632 I 0.000
MAPG_07612 Magnaporthe poae MAPG_07612 I 0.000
MBM_06431 Marssonina brunnea MBM_06431 I 0.000
MAC_03525 Metarhizium acridum MAC_03525 I 0.000
MAC_00870 Metarhizium acridum MAC_00870 I 0.000
MAM_03270 Metarhizium album MAM_03270 I 0.000
MAM_00786 Metarhizium album MAM_00786 I 0.000
MANI_028570 Metarhizium anisopliae MANI_028570 I 0.000
MANI_016891 Metarhizium anisopliae MANI_016891 I 0.000
MBR_02489 Metarhizium brunneum MBR_02489 I 0.000
MBR_08061 Metarhizium brunneum MBR_08061 I 0.000
MGU_00524 Metarhizium guizhouense MGU_00524 I 0.000
MGU_03543 Metarhizium guizhouense MGU_03543 I 0.000
MAJ_00150 Metarhizium majus MAJ_00150 I 0.000
MAJ_03937 Metarhizium majus MAJ_03937 I 0.000
X797_006365 Metarhizium robertsii X797_006365 I 0.000
X797_000525 Metarhizium robertsii X797_000525 I 0.000
MCYG_04996 Microsporum canis MCYG_04996 I 0.000
MGYG_07857 Microsporum gypseum MGYG_07857 I 0.000
MYCTH_2306522 Myceliophthora thermophila MYCTH_2306522 I 0.000
MYCTH_2298160 Myceliophthora thermophila MYCTH_2298160 I 0.000
e_gw1.1.3908.1 Mycosphaerella fijiensis e_gw1.1.3908.1 I 0.000
e_gw1.1.444.1 Mycosphaerella graminicola e_gw1.1.444.1 I 0.000
estExt_Genewise1Plus.C_sca_2_chr3_3_01039 Nectria haematococca estExt_Genewise1Plus.C_sca_2_chr3_3_01039 I 0.000
estExt_fgenesh1_pg.C_sca_2_chr3_3_00460 Nectria haematococca estExt_fgenesh1_pg.C_sca_2_chr3_3_00460 I 0.000
UCRNP2_9367 Neofusicoccum parvum UCRNP2_9367 I 0.000
NFIA_055660 Neosartorya fischeri CADNFIAG00004667 I 0.000
NCU03905 Neurospora crassa NCU03905 D 0.000
estExt_fgenesh3_pm.C_60520 Neurospora discreta estExt_fgenesh3_pm.C_60520 I 0.000
NEUTE1DRAFT_88066 Neurospora tetrasperma NEUTE1DRAFT_88066 I 0.000
OIDMADRAFT_198759 Oidiodendron maius OIDMADRAFT_198759 I 0.000
OCS_00262 Ophiocordyceps sinensis OCS_00262 I 0.000
F503_05471 Ophiostoma piceae uamh F503_05471 I 0.000
PABG_01850 Paracoccidioides brasiliensis PABG_01850 I 0.000
PAAG_01282 Paracoccidioides sp lutzii PAAG_01282 I 0.000
Pc20g15280 Penicillium chrysogenum Pc20g15280 I 0.000
PDIP_47000 Penicillium digitatum PDIP_47000 I 0.000
PEX1_003570 Penicillium expansum PEX1_003570 I 0.000
PITC_017070 Penicillium italicum PITC_017070 I 0.000
PMAA_063050 Penicillium marneffei PMAA_063050 I 0.000
PDE_03264 Penicillium oxalicum PDE_03264 I 0.000
PCH_Pc20g15280 Penicillium rubens PCH_Pc20g15280 I 0.000
U727_0043143031 Penicillium solitum U727_0043143031 I 0.000
PFICI_10263 Pestalotiopsis fici PFICI_10263 I 0.000
PODANS_4_8790 Podospora anserina PODANS_4_8790 I 0.000
MYCFIDRAFT_201498 Pseudocercospora fijiensis MYCFIDRAFT_201498 I 0.000
GMDG_08493 Pseudogymnoascus destructans GMDG_08493 I 0.000
PTT_06950 Pyrenophora teres PTT_06950 I 0.000
PTRG_01651 Pyrenophora triticirepentis PTRG_01651 I 0.000
Z518_07428 Rhinocladiella mackenziei Z518_07428 I 0.000
RO3G_09518 Rhizopus oryzae RO3G_09518 I 0.000
SAPIO_CDS9352 Scedosporium apiospermum SAPIO_CDS9352 I 0.000
SBOR_9706 Sclerotinia borealis SBOR_9706 I 0.000
SS1G_09561 Sclerotinia sclerotiorum SS1G_09561 I 0.000
SETTUDRAFT_18242 Setosphaeria turcica SETTUDRAFT_18242 I 0.000
SMAC_06328 Sordaria macrospora SMAC_06328 I 0.000
SEPMUDRAFT_145560 Sphaerulina musiva SEPMUDRAFT_145560 I 0.000
SPBR_06880 Sporothrix brasiliensis SPBR_06880 I 0.000
HMPREF1624_00195 Sporothrix schenckii HMPREF1624_00195 I 0.000
S40288_03027 Stachybotrys chartarum S40288_03027 I 0.000
S40288_03446 Stachybotrys chartarum S40288_03446 I 0.000
S40285_07743 Stachybotrys chlorohalonata S40285_07743 I 0.000
S40285_06845 Stachybotrys chlorohalonata S40285_06845 I 0.000
SNOG_06296 Stagonospora nodorum SNOG_06296 I 0.000
PMAA_063050 Talaromyces marneffei PMAA_063050 I 0.000
THITE_2109887 Thielavia terrestris THITE_2109887 I 0.000
UCRPA7_4629 Togninia minima UCRPA7_4629 I 0.000
VHEMI06877 Torrubiella hemipterigena VHEMI06877 I 0.000
TRIATDRAFT_164087 Trichoderma atroviride TRIATDRAFT_164087 I 0.000
TRIREDRAFT_49854 Trichoderma reesei TRIREDRAFT_49854 I 0.000
TRIVIDRAFT_150786 Trichoderma virens TRIVIDRAFT_150786 I 0.000
TRIVIDRAFT_115051 Trichoderma virens TRIVIDRAFT_115051 I 0.000
TEQG_02725 Trichophyton equinum TEQG_02725 I 0.000
H101_02345 Trichophyton interdigitale H101_02345 I 0.000
H102_05196 Trichophyton rubrum H102_05196 I 0.000
H105_05218 Trichophyton soudanense H105_05218 I 0.000
TESG_06643 Trichophyton tonsurans TESG_06643 I 0.000
TRV_04392 Trichophyton verrucosum TRV_04392 I 0.000
GSTUM_00000600001 Tuber melanosporum GSTUM_00000600001 I 0.000
UREG_01309 Uncinocarpus reesii UREG_01309 I 0.000
UV8b_489 Ustilaginoidea virens UV8b_489 I 0.000
PV09_04486 Verruconis gallopava PV09_04486 I 0.000
VDBG_08090 Verticillium albo atrum VDBG_08090 I 0.000
VDBG_08090 Verticillium alfalfae VDBG_08090 I 0.000
VDAG_01588 Verticillium dahliae VDAG_01588 I 0.000
YALI0_F03388g Yarrowia lipolytica YALI0_F03388g I 0.000
Mycgr3G35076 Zymoseptoria tritici Mycgr3G35076 I 0.000