Cla011318 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla011318 T006454_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.765 0.880
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.765 0.880
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.764 0.900
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.764 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla011318 AP2 20 71

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

150 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.821
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.799
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.790
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.790
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.788
29739.m003716 Ricinus communis 29739.m003716 I 0.788
Pm027117 Prunus mume Pm027117 I 0.788
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.783
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.781
TCM_037415 Theobroma cacao TCM_037415 I 0.780
TCM_037486 Theobroma cacao TCM_037486 I 0.779
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.778
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.778
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.776
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.776
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.776
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.774
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.774
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.774
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.774
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.774
Bo8g068370 Brassica oleracea Bo8g068370 I 0.774
Bra016518 Brassica rapa Bra016518 I 0.774
Bra031069 Brassica rapa Bra031069 I 0.773
Bo8g102870 Brassica oleracea Bo8g102870 I 0.773
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.772
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.772
MDP0000649022 Malus domestica MDP0000649022 I 0.771
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.770
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.770
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.768
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.768
mgf024162m Mimulus guttatus mgf024162m I 0.767
Ca_01683 Cicer arietinum Ca_01683 I 0.766
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.766
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.766
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.765
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.765
ERF018 Arabidopsis thaliana AT1G74930 D 0.765
Ca_09124 Cicer arietinum Ca_09124 I 0.765
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.765
Bra015882 Brassica rapa Bra015882 I 0.764
MDP0000704216 Malus domestica MDP0000704216 I 0.764
ERF017 Arabidopsis thaliana AT1G19210 D 0.764
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.764
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.764
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.764
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.764
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.764
mgf021940m Mimulus guttatus mgf021940m I 0.762
Bo6g119120 Brassica oleracea Bo6g119120 I 0.762
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.761
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.761
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.761
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.761
Cla022291 Citrullus lanatus Cla022291 I 0.761
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.761
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.760
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.759
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.759
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.757
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.757
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.757
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.757
Bo6g086740 Brassica oleracea Bo6g086740 I 0.757
Bra003780 Brassica rapa Bra003780 I 0.757
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.756
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.756
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.756
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.756
29739.m003647 Ricinus communis 29739.m003647 I 0.755
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.755
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.754
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.753
Cla007584 Citrullus lanatus Cla007584 I 0.753
mgf025452m Mimulus guttatus mgf025452m I 0.753
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.752
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.752
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.751
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.747
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.746
OS02G0781300 Oryza sativa OS02G0781300 I 0.746
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.746
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.746
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.746
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.746
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.746
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.746
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.746
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.746
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.746
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.745
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.744
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.744
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.744
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.743
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.743
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.743
Si019636m.g Setaria italica Si019636m.g I 0.743
Ca_19295 Cicer arietinum Ca_19295 I 0.741
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.740
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.740
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.739
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.739
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.739
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.739
Bra025719 Brassica rapa Bra025719 I 0.737
Ca_19296 Cicer arietinum Ca_19296 I 0.736
Ca_19297 Cicer arietinum Ca_19297 I 0.735
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.734
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.732
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.732
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.729
Bra006599 Brassica rapa Bra006599 I 0.726
Bo3g015600 Brassica oleracea Bo3g015600 I 0.726
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.725
Bo9g149820 Brassica oleracea Bo9g149820 I 0.725
Bra002377 Brassica rapa Bra002377 I 0.725
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.725
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.725
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.723
PK18548.1 Cannabis sativa PK18548.1 I 0.721
ERF016 Arabidopsis thaliana AT5G21960 I 0.719
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.719
Si008104m.g Setaria italica Si008104m.g I 0.716
Bo2g023630 Brassica oleracea Bo2g023630 I 0.715
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.714
Bra020162 Brassica rapa Bra020162 I 0.714
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.711
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.709
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.709
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.709
OB08G24280 Oryza brachyantha OB08G24280 I 0.709
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.709
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.709
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.709
OBART08G16950 Oryza barthii OBART08G16950 I 0.709
OS08G0454000 Oryza sativa OS08G0454000 I 0.709
Si015027m.g Setaria italica Si015027m.g I 0.709
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.709
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.709
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.709
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.707
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.704
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.702
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.700
F775_23111 Aegilops tauschii F775_23111 I 0.700
Sb07g022265 Sorghum bicolor Sb07g022265 I 0.695
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.684
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.677