Cla012194 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla012194 T006460_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.706 0.774
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla012194 AP2 71 131

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.130200 Cucumis sativus Cucsa.130200 I 0.816
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.722
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.716
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.712
29729.m002292 Ricinus communis 29729.m002292 I 0.710
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.709
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.708
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.708
PK07402.1 Cannabis sativa PK07402.1 D 0.706
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.706
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.703
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.703
Pm018989 Prunus mume Pm018989 I 0.700
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.700
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.697
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.697
Bo9g177130 Brassica oleracea Bo9g177130 I 0.695
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.694
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.693
Cla006713 Citrullus lanatus Cla006713 I 0.692
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.691
MDP0000147009 Malus domestica MDP0000147009 I 0.691
MDP0000446783 Malus domestica MDP0000446783 I 0.691
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.691
MDP0000165880 Malus domestica MDP0000165880 I 0.691
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.688
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.688
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.688
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.686
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.685
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.685
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.685
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.685
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.683
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.683
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.682
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.682
Bra006460 Brassica rapa Bra006460 I 0.682
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.682
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.682
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.682
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.682
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.682
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.682
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.682
OBART03G05550 Oryza barthii OBART03G05550 I 0.682
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.682
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.682
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.682
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.682
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.682
Bo3g013160 Brassica oleracea Bo3g013160 I 0.682
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.682
DREB2E Oryza sativa OS03G0174400 I 0.682
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.682
Bo4g190040 Brassica oleracea Bo4g190040 I 0.681
Bra017011 Brassica rapa Bra017011 I 0.681
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.681
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.681
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.680
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.680
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.680
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.680
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.680
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.679
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.679
TCM_024756 Theobroma cacao TCM_024756 I 0.679
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.679
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.679
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.679
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.679
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.679
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.679
Ca_07264 Cicer arietinum Ca_07264 I 0.679
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.679
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.679
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.679
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.679
Ca_12446 Cicer arietinum Ca_12446 I 0.679
27810.m000639 Ricinus communis 27810.m000639 I 0.679
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.678