Cla012665 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla012665 T006465_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF021
M06593_2.00
Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD

HGDCGGYGRHGRHGRHGRND
Dap-seq
OMalley et al.(2016)
AT1G71450_col_a
0.785 0.900
ERF021
M06594_2.00
Arabidopsis thaliana
NHNNCRCCGHCDH

DHGDCGGYGNNDN
Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a
0.785 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla012665 AP2 15 66

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.833
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.812
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.803
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.798
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.797
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.797
Pm004269 Prunus mume Pm004269 I 0.797
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.796
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.796
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.796
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.796
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.793
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.791
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.789
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.789
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.788
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.788
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.787
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.787
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.787
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.787
ERF021 Arabidopsis thaliana AT1G71450 D 0.785
Bo2g072910 Brassica oleracea Bo2g072910 I 0.785
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.785
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.785
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.785
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.784
TCM_036269 Theobroma cacao TCM_036269 I 0.783
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.781
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.781
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.780
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.780
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.778
MDP0000283350 Malus domestica MDP0000283350 I 0.778
28118.m000034 Ricinus communis 28118.m000034 I 0.776
Bra016136 Brassica rapa Bra016136 I 0.776
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.775
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.775
TCM_036270 Theobroma cacao TCM_036270 I 0.772
Bra007975 Brassica rapa Bra007975 I 0.770
Bo6g113020 Brassica oleracea Bo6g113020 I 0.769
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.766
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.765
Bra010210 Brassica rapa Bra010210 I 0.760
Bo8g027240 Brassica oleracea Bo8g027240 I 0.758
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.754
ERF022 Arabidopsis thaliana AT1G33760 I 0.753
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.747
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.746
Bo6g094210 Brassica oleracea Bo6g094210 I 0.746
Bra003924 Brassica rapa Bra003924 I 0.746
Bo5g086680 Brassica oleracea Bo5g086680 I 0.744
Pm004272 Prunus mume Pm004272 I 0.743
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.743
Ca_15064 Cicer arietinum Ca_15064 I 0.742
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.741
Bostr.10273s0203 Boechera stricta Bostr.10273s0203 I 0.741
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.741
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.740
27805.m000021 Ricinus communis 27805.m000021 I 0.739
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.739
Bra028009 Brassica rapa Bra028009 I 0.739
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.736
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.735
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.734
Cla012661 Citrullus lanatus Cla012661 I 0.734
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.733
Bo6g046850 Brassica oleracea Bo6g046850 I 0.733
MDP0000151428 Malus domestica MDP0000151428 I 0.731
MDP0000122740 Malus domestica MDP0000122740 I 0.731
MDP0000122739 Malus domestica MDP0000122739 I 0.731
Si026882m.g Setaria italica Si026882m.g I 0.729
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.728
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.725
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.725
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.724
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.724
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.722
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.722
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.722
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.722
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.722
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.719
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.718
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.716
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.713
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.712
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I 0.710
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.710
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.709
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.709
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.709
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.709
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.709
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.709
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.709
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.709
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.709
OS11G0242300 Oryza sativa OS11G0242300 I 0.709
OB11G16300 Oryza brachyantha OB11G16300 I 0.709
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.709
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.709
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.708
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.704
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.704
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.704
F775_17299 Aegilops tauschii F775_17299 I 0.704
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.704
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.704
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.702
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.700
SapurV1A.0601s0170 Salix purpurea SapurV1A.0601s0170 N 0.697
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.696
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.692
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I 0.691
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I 0.691
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I 0.691
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I 0.691
Ciclev10022410m.g Citrus clementina Ciclev10022410m.g I 0.690
orange1.1g029627m.g Citrus sinensis orange1.1g029627m.g I 0.690
mgf020568m Mimulus guttatus mgf020568m I 0.686
Ca_01325 Cicer arietinum Ca_01325 I 0.685
GLYMA03G41910 Glycine max GLYMA03G41910 I 0.683
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.683
SapurV1A.0003s1030 Salix purpurea SapurV1A.0003s1030 I 0.682
GLYMA16G02680 Glycine max GLYMA16G02680 I 0.682
chr1.LjT43L07.200.nd Lotus japonicus chr1.LjT43L07.200.nd I 0.682
PK15554.1 Cannabis sativa PK15554.1 I 0.682
gene19141-v1.0-hybrid Fragaria vesca gene19141-v1.0-hybrid I 0.682
GLYMA19G44580 Glycine max GLYMA19G44580 I 0.680
Pm018354 Prunus mume Pm018354 I 0.678
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I 0.678
PRUPE_ppa026139mg Prunus persica PRUPE_ppa026139mg I 0.678
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.677
cassava43608.valid.m1 Manihot esculenta cassava43608.valid.m1 I 0.677