CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla013460
(
Citrullus lanatus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Cla013460
T006473_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla013460
AP2
156
205
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHSAARAYDRAAIKFRG
Cla013460
AP2
259
309
SKYRGVTLHKCGRWEARMGQLLGKKAYDKAAIKCNGREAVTNFEPSTYGER
Links
Other
AP2
family TFs
Other
Citrullus lanatus
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.051660
Cucumis sativus
Cucsa.051660
I
0.766
Aquca_027_00133
Aquilegia coerulea
Aquca_027_00133
I
0.731
GLYMA13G40470
Glycine max
GLYMA13G40470
I
0.730
OLONG_026757
Oryza longistaminata
OLONG_026757
I
0.728
OMERI05G01620
Oryza meridionalis
OMERI05G01620
N
0.728
ORUFI05G01620
Oryza rufipogon
ORUFI05G01620
N
0.728
OPUNC05G01480
Oryza punctata
OPUNC05G01480
I
0.728
ONIVA05G01600
Oryza nivara
ONIVA05G01600
N
0.728
OGLUM05G01570
Oryza glumaepatula
OGLUM05G01570
N
0.728
LPERR05G01420
Leersia perrieri
LPERR05G01420
I
0.728
Pavir.J23348
Panicum virgatum
Pavir.J23348
I
0.728
GRMZM2G700665
Zea mays
GRMZM2G700665
I
0.728
Pavir.J11433
Panicum virgatum
Pavir.J11433
I
0.728
GLYMA12G07800
Glycine max
GLYMA12G07800
I
0.728
TCM_022077
Theobroma cacao
TCM_022077
I
0.726
orange1.1g010454m.g
Citrus sinensis
orange1.1g010454m.g
I
0.726
SapurV1A.0247s0170
Salix purpurea
SapurV1A.0247s0170
I
0.726
Solyc09g007260.2
Solanum lycopersicum
Solyc09g007260.2
N
0.726
PGSC0003DMG400027904
Solanum tuberosum
PGSC0003DMG400027904
I
0.726
PGSC0003DMG400025390
Solanum tuberosum
PGSC0003DMG400025390
I
0.726
GLYMA11G15650
Glycine max
GLYMA11G15650
I
0.726
BRADI2G37800
Brachypodium distachyon
BRADI2G37800
I
0.726
SapurV1A.0209s0320
Salix purpurea
SapurV1A.0209s0320
I
0.725
TCM_042000
Theobroma cacao
TCM_042000
I
0.724
RAP2.7
Arabidopsis lyrata
fgenesh2_kg.4__825__AT2G28550.1
N
0.689
Thhalv10016626m.g
Eutrema salsugineum
Thhalv10016626m.g
I
0.689
Cagra.1809s0003
Capsella grandiflora
Cagra.1809s0003
I
0.689
RAP2.7
Arabidopsis thaliana
AT2G28550
D
0.689
orange1.1g010763m.g
Citrus sinensis
orange1.1g010763m.g
I
0.688
MTR_2g093060
Medicago truncatula
MTR_2g093060
I
0.687
TCM_043051
Theobroma cacao
TCM_043051
N
0.686
Sb09g002080
Sorghum bicolor
Sb09g002080
N
0.686
Bostr.27991s0069
Boechera stricta
Bostr.27991s0069
N
0.685