Cla015065 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla015065 T006483_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.760 0.837
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.708 0.735
ERF11
M01606_2.00 		Arabidopsis thaliana
NHGCCGNHNN
NNDNCGGCDN		 PBM
Weirauch et al.(2014)
pTH8117 		0.686 0.653
ERF11
M06575_2.00 		Arabidopsis thaliana
NHNNHDSCGCCGYCRHHNNN
NNNDDYGRCGGCGSHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF11_colamp_a 		0.686 0.653
ERF11
M06576_2.00 		Arabidopsis thaliana
NHNYCKCCGCCGYHD
HDRCGGCGGMGRNDN		 Dap-seq
OMalley et al.(2016)
ERF11_col_b 		0.686 0.653
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla015065 AP2 17 69

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

259 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.388540 Cucumis sativus Cucsa.388540 I 0.835
VIT_07s0005g03220 Vitis vinifera VIT_07s0005g03220 I 0.825
Pm020605 Prunus mume Pm020605 I 0.789
gene08075-v1.0-hybrid Fragaria vesca gene08075-v1.0-hybrid I 0.789
PRUPE_ppa020642mg Prunus persica PRUPE_ppa020642mg I 0.789
Eucgr.B01541 Eucalyptus grandis Eucgr.B01541 I 0.778
mgf026487m Mimulus guttatus mgf026487m I 0.777
cassava41639.m1 Manihot esculenta cassava41639.m1 I 0.774
fgenesh2_kg.3__2538__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.3__2538__AT3G23230.1 I 0.774
mgf021973m Mimulus guttatus mgf021973m I 0.774
fgenesh2_kg.471__1__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.471__1__AT3G23230.1 I 0.774
SapurV1A.0233s0380 Salix purpurea SapurV1A.0233s0380 I 0.771
MDP0000286915 Malus domestica MDP0000286915 I 0.769
POPTR_0005s24450 Populus trichocarpa POPTR_0005s24450 I 0.768
ERF098 Arabidopsis thaliana AT3G23230 D 0.760
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I 0.760
Carubv10015406m.g Capsella rubella Carubv10015406m.g I 0.760
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I 0.760
Ca_12080 Cicer arietinum Ca_12080 I 0.759
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I 0.756
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I 0.756
GLYMA20G34560 Glycine max GLYMA20G34560 I 0.748
GLYMA10G33070 Glycine max GLYMA10G33070 I 0.748
MTR_1g074310 Medicago truncatula MTR_1g074310 I 0.746
29584.m000235 Ricinus communis 29584.m000235 I 0.746
Gorai.001G176700 Gossypium raimondii Gorai.001G176700 I 0.745
TCM_004061 Theobroma cacao TCM_004061 I 0.745
cassava19171.valid.m1 Manihot esculenta cassava19171.valid.m1 I 0.745
SapurV1A.0006s0860 Salix purpurea SapurV1A.0006s0860 I 0.741
Bo1g102220 Brassica oleracea Bo1g102220 I 0.740
Bra023748 Brassica rapa Bra023748 I 0.740
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.739
GLYMA10G00990 Glycine max GLYMA10G00990 I 0.737
POPTR_0002s04030 Populus trichocarpa POPTR_0002s04030 I 0.733
cassava41615.m1 Manihot esculenta cassava41615.m1 I 0.732
Ciclev10023656m.g Citrus clementina Ciclev10023656m.g I 0.731
gene08073-v1.0-hybrid Fragaria vesca gene08073-v1.0-hybrid I 0.731
Ciclev10023546m.g Citrus clementina Ciclev10023546m.g I 0.730
Cla021851 Citrullus lanatus Cla021851 I 0.729
Gorai.001G252700 Gossypium raimondii Gorai.001G252700 I 0.729
Gorai.001G252900 Gossypium raimondii Gorai.001G252900 I 0.729
Bra014925 Brassica rapa Bra014925 I 0.727
MDP0000830129 Malus domestica MDP0000830129 I 0.727
Bo7g040810 Brassica oleracea Bo7g040810 I 0.727
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.726
MDP0000930655 Malus domestica MDP0000930655 I 0.724
Gorai.007G145700 Gossypium raimondii Gorai.007G145700 I 0.724
evm.TU.supercontig_50.28 Carica papaya evm.TU.supercontig_50.28 I 0.723
Lus10021196.g Linum usitatissimum Lus10021196.g I 0.722
OBART10G11630 Oryza barthii OBART10G11630 I 0.718
BGIOSGA031822 Oryza indica BGIOSGA031822 I 0.718
ORUFI10G12140 Oryza rufipogon ORUFI10G12140 I 0.718
OPUNC10G09910 Oryza punctata OPUNC10G09910 I 0.718
ORGLA10G0102500 Oryza glaberrima ORGLA10G0102500 I 0.718
Cla007696 Citrullus lanatus Cla007696 I 0.718
OGLUM10G11380 Oryza glumaepatula OGLUM10G11380 I 0.718
ONIVA10G10810 Oryza nivara ONIVA10G10810 I 0.718
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.716
MDP0000312701 Malus domestica MDP0000312701 I 0.715
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.715
Ca_07755 Cicer arietinum Ca_07755 I 0.714
Lus10011831.g Linum usitatissimum Lus10011831.g I 0.713
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.712
Lus10022936.g Linum usitatissimum Lus10022936.g I 0.711
LPERR04G03550 Leersia perrieri LPERR04G03550 I 0.711
Lus10024883.g Linum usitatissimum Lus10024883.g I 0.711
OGLUM04G04620 Oryza glumaepatula OGLUM04G04620 I 0.709
ORGLA04G0041100 Oryza glaberrima ORGLA04G0041100 I 0.709
OLONG_027600 Oryza longistaminata OLONG_027600 I 0.709
Gorai.006G249800 Gossypium raimondii Gorai.006G249800 I 0.709
ONIVA04G03680 Oryza nivara ONIVA04G03680 I 0.709
GSMUA_Achr1G15350_001 Musa acuminata GSMUA_Achr1G15350_001 I 0.709
OS04G0257500 Oryza sativa OS04G0257500 I 0.709
OB04G14270 Oryza brachyantha OB04G14270 I 0.709
OBART04G05450 Oryza barthii OBART04G05450 I 0.709
ORUFI04G06330 Oryza rufipogon ORUFI04G06330 I 0.709
BGIOSGA015474 Oryza indica BGIOSGA015474 I 0.709
Bra027493 Brassica rapa Bra027493 I 0.708
TCM_020869 Theobroma cacao TCM_020869 I 0.708
Bo9g059180 Brassica oleracea Bo9g059180 I 0.708
scaffold_800707.1 Arabidopsis lyrata scaffold_800707.1 I 0.708
Bostr.3148s0125 Boechera stricta Bostr.3148s0125 I 0.708
Cagra.0244s0009 Capsella grandiflora Cagra.0244s0009 I 0.708
Carubv10028227m.g Capsella rubella Carubv10028227m.g I 0.708
ERF096 Arabidopsis thaliana AT5G43410 D 0.708
Gorai.005G049200 Gossypium raimondii Gorai.005G049200 I 0.708
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.707
TRAES3BF046300130CFD_g Triticum aestivum TRAES3BF046300130CFD_g I 0.707
AMTR_s00009p00147970 Amborella trichopoda AMTR_s00009p00147970 I 0.707
OMERI03G03710 Oryza meridionalis OMERI03G03710 I 0.706
POPTR_0010s08310 Populus trichocarpa POPTR_0010s08310 I 0.706
Thhalv10003355m.g Eutrema salsugineum Thhalv10003355m.g I 0.705
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.704
cassava38545.m1 Manihot esculenta cassava38545.m1 I 0.704
VIT_07s0005g03200 Vitis vinifera VIT_07s0005g03200 I 0.704
Cucsa.383680 Cucumis sativus Cucsa.383680 I 0.703
TCM_020870 Theobroma cacao TCM_020870 I 0.703
Eucgr.H03090 Eucalyptus grandis Eucgr.H03090 I 0.703
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.701
cassava631.valid.m1 Manihot esculenta cassava631.valid.m1 I 0.701
SapurV1A.0007s0960 Salix purpurea SapurV1A.0007s0960 I 0.701
VIT_07s0005g03190 Vitis vinifera VIT_07s0005g03190 I 0.701
Ca_06034 Cicer arietinum Ca_06034 I 0.700
OB09G27120 Oryza brachyantha OB09G27120 I 0.700
MTR_5g085100 Medicago truncatula MTR_5g085100 I 0.699
VIT_07s0005g03210 Vitis vinifera VIT_07s0005g03210 I 0.699
cassava38508.m1 Manihot esculenta cassava38508.m1 I 0.698
Pm003579 Prunus mume Pm003579 I 0.698
LPERR09G16370 Leersia perrieri LPERR09G16370 I 0.698
Solyc09g089910.1 Solanum lycopersicum Solyc09g089910.1 I 0.698
PRUPE_ppa016384mg Prunus persica PRUPE_ppa016384mg I 0.698
ORGLA09G0166700 Oryza glaberrima ORGLA09G0166700 I 0.698
OBART09G20380 Oryza barthii OBART09G20380 I 0.698
OS09G0571700 Oryza sativa OS09G0571700 I 0.698
OGLUM09G21140 Oryza glumaepatula OGLUM09G21140 I 0.698
OLONG_005596 Oryza longistaminata OLONG_005596 I 0.698
ONIVA01G39370 Oryza nivara ONIVA01G39370 I 0.698
OPUNC09G18680 Oryza punctata OPUNC09G18680 I 0.698
PGSC0003DMG400017233 Solanum tuberosum PGSC0003DMG400017233 I 0.698
ORUFI09G22030 Oryza rufipogon ORUFI09G22030 I 0.698
MTR_7g081795 Medicago truncatula MTR_7g081795 I 0.698
BGIOSGA029230 Oryza indica BGIOSGA029230 I 0.698
evm.TU.supercontig_44.74 Carica papaya evm.TU.supercontig_44.74 I 0.697
Bo9g001020 Brassica oleracea Bo9g001020 I 0.697
OB10G18940 Oryza brachyantha OB10G18940 I 0.696
Pavir.Bb01308 Panicum virgatum Pavir.Bb01308 I 0.696
Cucsa.260040 Cucumis sativus Cucsa.260040 I 0.696
gene16619-v1.0-hybrid Fragaria vesca gene16619-v1.0-hybrid I 0.696
Solyc11g006050.1 Solanum lycopersicum Solyc11g006050.1 I 0.696
GRMZM2G060517 Zea mays GRMZM2G060517 I 0.696
Si032391m.g Setaria italica Si032391m.g I 0.696
Gorai.001G176600 Gossypium raimondii Gorai.001G176600 I 0.695
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.695
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.695
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I 0.695
GSMUA_Achr4G05510_001 Musa acuminata GSMUA_Achr4G05510_001 I 0.695
gene11440-v1.0-hybrid Fragaria vesca gene11440-v1.0-hybrid I 0.695
PGSC0003DMG400045092 Solanum tuberosum PGSC0003DMG400045092 I 0.694
BRADI1G75040 Brachypodium distachyon BRADI1G75040 I 0.694
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.693
Ca_06032 Cicer arietinum Ca_06032 I 0.692
Cucsa.255320 Cucumis sativus Cucsa.255320 I 0.692
Eucgr.H03091 Eucalyptus grandis Eucgr.H03091 I 0.692
MTR_7g081805 Medicago truncatula MTR_7g081805 I 0.692
Lus10011830.g Linum usitatissimum Lus10011830.g I 0.692
MTR_7g081815 Medicago truncatula MTR_7g081815 I 0.692
SapurV1A.0006s0870 Salix purpurea SapurV1A.0006s0870 I 0.692
PRUPE_ppa013137mg Prunus persica PRUPE_ppa013137mg I 0.692
Cla021852 Citrullus lanatus Cla021852 I 0.692
29603.m000510 Ricinus communis 29603.m000510 I 0.691
29603.m000509 Ricinus communis 29603.m000509 I 0.691
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.691
Traes_4AS_FA4BBDBF9 Triticum aestivum Traes_4AS_FA4BBDBF9 I 0.691
Traes_4BS_180379032 Triticum aestivum Traes_4BS_180379032 I 0.691
Traes_4DS_AB2BEFAB3 Triticum aestivum Traes_4DS_AB2BEFAB3 I 0.691
TRIUR3_22798 Triticum urartu TRIUR3_22798 I 0.691
F775_23071 Aegilops tauschii F775_23071 I 0.691
VIT_15s0046g01390 Vitis vinifera VIT_15s0046g01390 I 0.691
POPTR_0008s16600 Populus trichocarpa POPTR_0008s16600 I 0.691
GLYMA03G31930 Glycine max GLYMA03G31930 I 0.691
Pavir.Ib00287 Panicum virgatum Pavir.Ib00287 I 0.690
GLYMA20G34550 Glycine max GLYMA20G34550 I 0.690
Sb01g046920 Sorghum bicolor Sb01g046920 I 0.690
Pavir.J22854 Panicum virgatum Pavir.J22854 I 0.690
AC198979.4_FG009 Zea mays AC198979.4_FG009 I 0.690
Si039759m.g Setaria italica Si039759m.g I 0.690
Pm018418 Prunus mume Pm018418 I 0.690
Ciclev10007133m.g Citrus clementina Ciclev10007133m.g I 0.689
AMTR_s00009p00148470 Amborella trichopoda AMTR_s00009p00148470 I 0.689
orange1.1g047241m.g Citrus sinensis orange1.1g047241m.g I 0.689
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.689
Pavir.Ia01823 Panicum virgatum Pavir.Ia01823 I 0.688
GRMZM2G009598 Zea mays GRMZM2G009598 I 0.688
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.687
cassava3323.m1 Manihot esculenta cassava3323.m1 I 0.687
VIT_05s0049g00490 Vitis vinifera VIT_05s0049g00490 I 0.687
POPTR_0002s04040 Populus trichocarpa POPTR_0002s04040 I 0.686
Ciclev10006784m.g Citrus clementina Ciclev10006784m.g I 0.686
Cla021383 Citrullus lanatus Cla021383 I 0.686
orange1.1g048608m.g Citrus sinensis orange1.1g048608m.g I 0.686
GLYMA02G00890 Glycine max GLYMA02G00890 I 0.686
Traes_6BS_4C945B9F1 Triticum aestivum Traes_6BS_4C945B9F1 I 0.686
ERF11 Arabidopsis thaliana AT1G28370 D 0.686
ONIVA03G03670 Oryza nivara ONIVA03G03670 I 0.684
ORGLA03G0036700 Oryza glaberrima ORGLA03G0036700 I 0.684
LPERR03G03540 Leersia perrieri LPERR03G03540 I 0.684
BGIOSGA011868 Oryza indica BGIOSGA011868 I 0.684
OBART03G03890 Oryza barthii OBART03G03890 I 0.684
OGLUM03G03790 Oryza glumaepatula OGLUM03G03790 I 0.684
Eucgr.H04254 Eucalyptus grandis Eucgr.H04254 I 0.684
OLONG_008277 Oryza longistaminata OLONG_008277 I 0.684
mgf018935m Mimulus guttatus mgf018935m I 0.684
BRADI2G07357 Brachypodium distachyon BRADI2G07357 I 0.684
OS03G0150200 Oryza sativa OS03G0150200 I 0.684
ORUFI03G03630 Oryza rufipogon ORUFI03G03630 I 0.684
LPERR10G08470 Leersia perrieri LPERR10G08470 I 0.683
Si039310m.g Setaria italica Si039310m.g I 0.683
Solyc09g089920.1 Solanum lycopersicum Solyc09g089920.1 I 0.683
GRMZM2G024871 Zea mays GRMZM2G024871 I 0.683
MDP0000155543 Malus domestica MDP0000155543 I 0.683
Sb01g020555 Sorghum bicolor Sb01g020555 I 0.683
Pm009384 Prunus mume Pm009384 I 0.683
GLYMA10G04190 Glycine max GLYMA10G04190 I 0.683
GLYMA13G18400 Glycine max GLYMA13G18400 I 0.683
PGSC0003DMG400046646 Solanum tuberosum PGSC0003DMG400046646 I 0.683
SapurV1A.0021s0990 Salix purpurea SapurV1A.0021s0990 I 0.682
OPUNC03G03600 Oryza punctata OPUNC03G03600 I 0.682
TCM_004062 Theobroma cacao TCM_004062 I 0.682
GRMZM2G044077 Zea mays GRMZM2G044077 I 0.682
SapurV1A.0292s0010 Salix purpurea SapurV1A.0292s0010 I 0.682
LjSGA_028626.1 Lotus japonicus LjSGA_028626.1 I 0.681
POPTR_0010s08330 Populus trichocarpa POPTR_0010s08330 I 0.681
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I 0.681
29584.m000237 Ricinus communis 29584.m000237 I 0.681
F775_21583 Aegilops tauschii F775_21583 I 0.681
GRMZM2G142179 Zea mays GRMZM2G142179 I 0.680
GLYMA10G33080 Glycine max GLYMA10G33080 I 0.680
Si002247m.g Setaria italica Si002247m.g I 0.680
ORUFI01G08530 Oryza rufipogon ORUFI01G08530 I 0.680
Pavir.Ea00119 Panicum virgatum Pavir.Ea00119 I 0.680
TRAES3BF017100030CFD_g Triticum aestivum TRAES3BF017100030CFD_g I 0.680
Pavir.Eb00092 Panicum virgatum Pavir.Eb00092 I 0.680
Sb03g001296 Sorghum bicolor Sb03g001296 I 0.680
SapurV1A.0021s1000 Salix purpurea SapurV1A.0021s1000 I 0.680
Ca_17824 Cicer arietinum Ca_17824 I 0.680
OMERI01G07770 Oryza meridionalis OMERI01G07770 I 0.680
POPTR_0008s16590 Populus trichocarpa POPTR_0008s16590 I 0.680
OGLUM01G08910 Oryza glumaepatula OGLUM01G08910 I 0.680
ONIVA01G10020 Oryza nivara ONIVA01G10020 I 0.680
OPUNC01G07600 Oryza punctata OPUNC01G07600 I 0.680
OS01G0224100 Oryza sativa OS01G0224100 I 0.680
ORGLA01G0069400 Oryza glaberrima ORGLA01G0069400 I 0.680
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.680
mgf018792m Mimulus guttatus mgf018792m I 0.680
OB03G13950 Oryza brachyantha OB03G13950 I 0.680
LPERR01G07340 Leersia perrieri LPERR01G07340 I 0.680
MLOC_238 Hordeum vulgare MLOC_238 I 0.680
GSMUA_Achr9G28840_001 Musa acuminata GSMUA_Achr9G28840_001 I 0.680
MLOC_58641 Hordeum vulgare MLOC_58641 I 0.680
SapurV1A.0292s0020 Salix purpurea SapurV1A.0292s0020 I 0.680
Pm017699 Prunus mume Pm017699 I 0.679
chr3.CM0080.80.nd Lotus japonicus chr3.CM0080.80.nd I 0.679
LjSGA_078116.1 Lotus japonicus LjSGA_078116.1 I 0.679
GRMZM2G328197 Zea mays GRMZM2G328197 I 0.679
GSMUA_Achr6G14240_001 Musa acuminata GSMUA_Achr6G14240_001 I 0.679
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.679
GSMUA_Achr10G01110_001 Musa acuminata GSMUA_Achr10G01110_001 I 0.679
Pavir.J13096 Panicum virgatum Pavir.J13096 I 0.679
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.678
MTR_1g070070 Medicago truncatula MTR_1g070070 I 0.678
LPERR02G21480 Leersia perrieri LPERR02G21480 I 0.678
POPTR_0001s11770 Populus trichocarpa POPTR_0001s11770 I 0.678
SapurV1A.1065s0020 Salix purpurea SapurV1A.1065s0020 I 0.678
SapurV1A.0094s0620 Salix purpurea SapurV1A.0094s0620 I 0.678
Eucgr.B01537 Eucalyptus grandis Eucgr.B01537 I 0.677
GLYMA10G04160 Glycine max GLYMA10G04160 I 0.677
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.677
LPERR03G35710 Leersia perrieri LPERR03G35710 I 0.677
GLYMA13G18330 Glycine max GLYMA13G18330 I 0.677