Cla015579 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla015579 T006487_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN

NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.857 0.980
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH

DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.857 0.980
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN

NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.727 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla015579 AP2 6 57

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA002103 Oryza indica BGIOSGA002103 N 0.000
BRADI2G07297 Brachypodium distachyon BRADI2G07297 N 0.000
evm.TU.supercontig_3.39 Carica papaya evm.TU.supercontig_3.39 N 0.000
GSMUA_Achr8G19830_001 Musa acuminata GSMUA_Achr8G19830_001 N 0.000
MLOC_67613 Hordeum vulgare MLOC_67613 N 0.000
OB01G17890 Oryza brachyantha OB01G17890 N 0.000
ORGLA01G0068100 Oryza glaberrima ORGLA01G0068100 N 0.000
OS01G0222700 Oryza sativa OS01G0222700 N 0.000
Pavir.Ea00125 Panicum virgatum Pavir.Ea00125 N 0.000
Pavir.Eb00173 Panicum virgatum Pavir.Eb00173 N 0.000
PGSC0003DMG400009096 Solanum tuberosum PGSC0003DMG400009096 N 0.000
Sb03g001335 Sorghum bicolor Sb03g001335 N 0.000
Solyc03g007510.2 Solanum lycopersicum Solyc03g007510.2 N 0.000
Traes_3DS_5523A155D Triticum aestivum Traes_3DS_5523A155D N 0.000
TRIUR3_07707 Triticum urartu TRIUR3_07707 N 0.000