Cla017294 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla017294 T006494_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla017294 AP2 64 123
Cla017294 AP2 166 218

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.859
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.859
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.859
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.859
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.856
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.856
PK24809.1 Cannabis sativa PK24809.1 I 0.854
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.850
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.850
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.850
MDP0000206674 Malus domestica MDP0000206674 N 0.848
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.847
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.843
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.842
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.842
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.842
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.842
MDP0000281784 Malus domestica MDP0000281784 I 0.840
MDP0000297698 Malus domestica MDP0000297698 N 0.838
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.838
MDP0000186581 Malus domestica MDP0000186581 N 0.838
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.837
TCM_018386 Theobroma cacao TCM_018386 N 0.837
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.830
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.830
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.827
Si007857m.g Setaria italica Si007857m.g N 0.825
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.825
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.825
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.824
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.822
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.822
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.822
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.822
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.822
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.822
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.822
OBART06G03040 Oryza barthii OBART06G03040 N 0.822
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.820
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.820
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.810
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.807
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.807
29822.m003477 Ricinus communis 29822.m003477 N 0.807
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.807
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.807
Bra035137 Brassica rapa Bra035137 I 0.807
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.806
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.804
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.802
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.802
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.802
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.802
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.802
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.802
Pm015847 Prunus mume Pm015847 N 0.802
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.801
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.801
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.801
Si022186m.g Setaria italica Si022186m.g I 0.801
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.801
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.801
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.801
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.801
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.801
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.801
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.800
Ca_10533 Cicer arietinum Ca_10533 N 0.800
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.799
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.798
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.798
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.798
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.798
OS06G0145700 Oryza sativa OS06G0145700 N 0.797
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.797
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.796
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.796
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.796
Si030129m.g Setaria italica Si030129m.g I 0.796
OS09G0423800 Oryza sativa OS09G0423800 I 0.796
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.796
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.796
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.796
OB09G17420 Oryza brachyantha OB09G17420 I 0.796
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.796
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.795
F775_02400 Aegilops tauschii F775_02400 I 0.794
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.794
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.794
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.794
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.793
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.793
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.792
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.792
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.791
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.791
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.790
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.790
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.790
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.790
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.790
Bo6g067950 Brassica oleracea Bo6g067950 I 0.790
OB12G11690 Oryza brachyantha OB12G11690 I 0.789
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.789
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.789
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.789
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.789
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.789
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.789
WRI1 Arabidopsis thaliana AT3G54320 I 0.789
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.789
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.789
Bo8g083590 Brassica oleracea Bo8g083590 I 0.789
OB11G11380 Oryza brachyantha OB11G11380 I 0.789
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.789
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.789
OS12G0126300 Oryza sativa OS12G0126300 I 0.789
TCM_027569 Theobroma cacao TCM_027569 I 0.789
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.789
Pm008629 Prunus mume Pm008629 I 0.789
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.789
Bra026082 Brassica rapa Bra026082 I 0.788
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.788
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.788
Pm006561 Prunus mume Pm006561 N 0.787
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.787
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.787
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.786
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.786
PK26651.1 Cannabis sativa PK26651.1 I 0.786
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.786
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.786
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.785
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.785
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.785
ADAP Arabidopsis thaliana AT1G16060 I 0.785
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.785
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.785
PK04008.1 Cannabis sativa PK04008.1 I 0.784
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.784
TCM_044588 Theobroma cacao TCM_044588 I 0.783
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.783
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.783
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.783
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.782
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.782
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.782
MDP0000166059 Malus domestica MDP0000166059 N 0.782
Ca_20689 Cicer arietinum Ca_20689 N 0.782
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.781
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.781
mgf008907m Mimulus guttatus mgf008907m I 0.781
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.781
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.781
OS08G0442400 Oryza sativa OS08G0442400 I 0.781
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.781
mgf019814m Mimulus guttatus mgf019814m N 0.779
TCM_011797 Theobroma cacao TCM_011797 N 0.779
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.777
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.775
mgf019116m Mimulus guttatus mgf019116m N 0.775
Bo6g124080 Brassica oleracea Bo6g124080 N 0.774
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.773
OB05G31600 Oryza brachyantha OB05G31600 I 0.773
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.773
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.773
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.772
Pm015843 Prunus mume Pm015843 N 0.770
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.769
mg013664m Mimulus guttatus mg013664m N 0.769
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.769
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.768
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.767
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.766
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.766
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.766
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.766
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.766
OBART09G10730 Oryza barthii OBART09G10730 N 0.766
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.765
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.765
Pm013856 Prunus mume Pm013856 N 0.765
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.764
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.764
MDP0000231748 Malus domestica MDP0000231748 N 0.764
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.764
Ca_17532 Cicer arietinum Ca_17532 N 0.764
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.764
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.763
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.762
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.762
TCM_038442 Theobroma cacao TCM_038442 N 0.762
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.762
MDP0000133423 Malus domestica MDP0000133423 N 0.762
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.762
MDP0000318457 Malus domestica MDP0000318457 N 0.762
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.762
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.762
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.762
Bo5g021520 Brassica oleracea Bo5g021520 N 0.761
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.761
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.761
OS05G0536250 Oryza sativa OS05G0536250 I 0.761
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.761
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.761
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.761
F775_02064 Aegilops tauschii F775_02064 N 0.760
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.759
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.758
Ca_03306 Cicer arietinum Ca_03306 N 0.758
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.758
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.758
Cla020765 Citrullus lanatus Cla020765 N 0.758
Cla019044 Citrullus lanatus Cla019044 N 0.758
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.757
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.757
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.757
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.757
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.757
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.757
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.757
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.757
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.757
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.757
30114.m000507 Ricinus communis 30114.m000507 N 0.757
Bra003178 Brassica rapa Bra003178 N 0.756
Cla015555 Citrullus lanatus Cla015555 N 0.756
Bra007066 Brassica rapa Bra007066 N 0.755
30069.m000440 Ricinus communis 30069.m000440 N 0.755
Pm017032 Prunus mume Pm017032 N 0.755
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.755
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.755
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.755
F775_06373 Aegilops tauschii F775_06373 N 0.754
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.753
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.753
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.751
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.751
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.751
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.749
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.747
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.747
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.747
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.747
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.747
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.747
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.746
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.746
Si026433m.g Setaria italica Si026433m.g N 0.746
Si012026m.g Setaria italica Si012026m.g N 0.746
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.746
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.745
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.743
OBART12G01740 Oryza barthii OBART12G01740 N 0.743
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.742
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.741
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.740
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.737
mgf017413m Mimulus guttatus mgf017413m N 0.733
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.730
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.729
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.727
Si013842m.g Setaria italica Si013842m.g N 0.724
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.720
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.715
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.701
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.694
POPTR_0008s01260 Populus trichocarpa POPTR_0008s01260 N 0.688
GSMUA_Achr3G09410_001 Musa acuminata GSMUA_Achr3G09410_001 N 0.686
OB01G43640 Oryza brachyantha OB01G43640 N 0.677
Pavir.Ia03819 Panicum virgatum Pavir.Ia03819 I 0.677