TF Information

Cla021417 *(Citrullus lanatus)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00847 (AP2)	IPR001471	Cla021417	T006520_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TINY M01094_2.00	Arabidopsis thaliana	NHRCCGACAN	NTGTCGGYDN	PBM Lambert et al.(2019) pTH11541	0.785	0.840
TINY M06669_2.00	Arabidopsis thaliana	HNYCRCCGACANHDN	NHDNTGTCGGYGRND	Dap-seq OMalley et al.(2016) TINY_col_a	0.785	0.840
ERF035 M06631_2.00	Arabidopsis thaliana	YCACCGACANWDNH	DNHWNTGTCGGTGR	Dap-seq OMalley et al.(2016) AT3G60490_col_a	0.701	0.840
ERF035 M06632_2.00	Arabidopsis thaliana	NNBCACCGACAHWNNN	NNNWDTGTCGGTGVNN	Dap-seq OMalley et al.(2016) AT3G60490_colamp_a	0.701	0.840
ERF034 M06614_2.00	Arabidopsis thaliana	NHNYCACCGACANHD	HDNTGTCGGTGRNDN	Dap-seq OMalley et al.(2016) At2g44940_col_a	0.701	0.860
ERF034 M06615_2.00	Arabidopsis thaliana	NDBCACCGACANH	DNTGTCGGTGVHN	Dap-seq OMalley et al.(2016) At2g44940_colamp_a	0.701	0.860
ERF043 M01627_2.00	Arabidopsis thaliana	YRCCGACA	TGTCGGYR	PBM Weirauch et al.(2014) pTH7413	0.691	0.780
ERF043 M06651_2.00	Arabidopsis thaliana	NNYCACCGACANHNNN	NNNDNTGTCGGTGRNN	Dap-seq OMalley et al.(2016) At4g32800_colamp_a	0.691	0.780
ERF043 M06652_2.00	Arabidopsis thaliana	NNYCACCGACANHNNH	DNNDNTGTCGGTGRNN	Dap-seq OMalley et al.(2016) At4g32800_col	0.691	0.780
For this family, TFs with SR scores > 0.677* will likely have a similar motif*