Cla023512 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla023512 T006541_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD

HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.793 0.980
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC

GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.782 0.960
ERF013
M06601_2.00
Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN

NNNNNNDNHDDTGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g77640_col_a
0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla023512 AP2 22 73

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ERF012 Arabidopsis thaliana AT1G21910 D 0.782
ERF014 Arabidopsis thaliana AT1G44830 D 0.793
ERF013 Arabidopsis thaliana AT1G77640 D 0.763
mgf021045m Mimulus guttatus mgf021045m I 0.793
Cucsa.372760 Cucumis sativus Cucsa.372760 I 0.796
Cucsa.365220 Cucumis sativus Cucsa.365220 I 0.793
cassava44357.m1 Manihot esculenta cassava44357.m1 I 0.783
cassava28944.valid.m1 Manihot esculenta cassava28944.valid.m1 I 0.793
29908.m006165 Ricinus communis 29908.m006165 I 0.793
mgf023290m Mimulus guttatus mgf023290m I 0.777
Aquca_014_00181 Aquilegia coerulea Aquca_014_00181 I 0.792
Bostr.12302s0095 Boechera stricta Bostr.12302s0095 I 0.793
Bostr.12659s0041 Boechera stricta Bostr.12659s0041 I 0.782
Bostr.20129s0200 Boechera stricta Bostr.20129s0200 I 0.763
Cagra.0096s0069 Capsella grandiflora Cagra.0096s0069 I 0.752
Cagra.1192s0001 Capsella grandiflora Cagra.1192s0001 I 0.793
Cagra.2306s0038 Capsella grandiflora Cagra.2306s0038 I 0.782
Pm004870 Prunus mume Pm004870 I 0.793
Cla014165 Citrullus lanatus Cla014165 I 0.793
POPTR_0005s15830 Populus trichocarpa POPTR_0005s15830 I 0.779
PRUPE_ppa010649mg Prunus persica PRUPE_ppa010649mg I 0.793
Sb01g040280 Sorghum bicolor Sb01g040280 I 0.751
Sb04g034290 Sorghum bicolor Sb04g034290 I 0.779
Sb10g006980 Sorghum bicolor Sb10g006980 I 0.764
Si007977m.g Setaria italica Si007977m.g I 0.770
Si039170m.g Setaria italica Si039170m.g I 0.751
Solyc11g012980.1 Solanum lycopersicum Solyc11g012980.1 I 0.789
TCM_035077 Theobroma cacao TCM_035077 I 0.793
Traes_4AS_18663793B Triticum aestivum Traes_4AS_18663793B I 0.707
Traes_4BL_762F09E09 Triticum aestivum Traes_4BL_762F09E09 I 0.707
Traes_4DL_FB8B5AAEB Triticum aestivum Traes_4DL_FB8B5AAEB I 0.707
VIT_18s0001g03240 Vitis vinifera VIT_18s0001g03240 I 0.796
Ca_25824 Cicer arietinum Ca_25824 I 0.793
Carubv10010179m.g Capsella rubella Carubv10010179m.g I 0.782
Carubv10010259m.g Capsella rubella Carubv10010259m.g I 0.793
Pavir.J02555 Panicum virgatum Pavir.J02555 I 0.779
Pavir.J23882 Panicum virgatum Pavir.J23882 I 0.770
Pavir.J26231 Panicum virgatum Pavir.J26231 I 0.770
Pavir.J30447 Panicum virgatum Pavir.J30447 I 0.720
SapurV1A.0010s0960 Salix purpurea SapurV1A.0010s0960 I 0.793
SapurV1A.0105s0160 Salix purpurea SapurV1A.0105s0160 I 0.780
SapurV1A.3198s0010 Salix purpurea SapurV1A.3198s0010 I 0.780
Thhalv10008639m.g Eutrema salsugineum Thhalv10008639m.g I 0.782
Thhalv10011778m.g Eutrema salsugineum Thhalv10011778m.g I 0.793
Thhalv10019045m.g Eutrema salsugineum Thhalv10019045m.g I 0.791
PK16069.1 Cannabis sativa PK16069.1 I 0.757
chr1.LjB21G05.120.nc Lotus japonicus chr1.LjB21G05.120.nc I 0.755
LjSGA_147935.1 Lotus japonicus LjSGA_147935.1 I 0.721
Pavir.Ib01111 Panicum virgatum Pavir.Ib01111 I 0.751
Pavir.Ia03856 Panicum virgatum Pavir.Ia03856 I 0.751
orange1.1g039680m.g Citrus sinensis orange1.1g039680m.g I 0.786
Carubv10020777m.g Capsella rubella Carubv10020777m.g I 0.752
Ciclev10002294m.g Citrus clementina Ciclev10002294m.g I 0.786
Eucgr.F03772 Eucalyptus grandis Eucgr.F03772 I 0.736
evm.TU.supercontig_36.41 Carica papaya evm.TU.supercontig_36.41 I 0.793
gene11145-v1.0-hybrid Fragaria vesca gene11145-v1.0-hybrid I 0.793
Gorai.002G220900 Gossypium raimondii Gorai.002G220900 I 0.793
Gorai.009G244500 Gossypium raimondii Gorai.009G244500 I 0.793
Gorai.010G048900 Gossypium raimondii Gorai.010G048900 I 0.793
Lus10003740.g Linum usitatissimum Lus10003740.g I 0.793
Lus10028032.g Linum usitatissimum Lus10028032.g I 0.793
MDP0000120147 Malus domestica MDP0000120147 I 0.793
MDP0000319736 Malus domestica MDP0000319736 I 0.765
MDP0000923690 Malus domestica MDP0000923690 I 0.793
LjT35E05.90.nd Lotus japonicus LjT35E05.90.nd I 0.755
BGIOSGA005542 Oryza indica BGIOSGA005542 I 0.779
F775_20580 Aegilops tauschii F775_20580 I 0.773
DREB26 Arabidopsis lyrata fgenesh2_kg.1__2381__AT1G21910.1 I 0.782
fgenesh2_kg.1__3777__AT1G44830.1 Arabidopsis lyrata fgenesh2_kg.1__3777__AT1G44830.1 I 0.793
fgenesh2_kg.2__2058__AT1G77640.1 Arabidopsis lyrata fgenesh2_kg.2__2058__AT1G77640.1 I 0.763
GLYMA04G43040 Glycine max GLYMA04G43040 I 0.793
GLYMA06G11700 Glycine max GLYMA06G11700 I 0.793
GLYMA13G02860 Glycine max GLYMA13G02860 I 0.793
GLYMA14G22970 Glycine max GLYMA14G22970 I 0.793
GRMZM2G007406 Zea mays GRMZM2G007406 I 0.743
GRMZM2G011110 Zea mays GRMZM2G011110 I 0.779
GRMZM2G015281 Zea mays GRMZM2G015281 I 0.751
GRMZM2G021369 Zea mays GRMZM2G021369 I 0.729
GRMZM2G084264 Zea mays GRMZM2G084264 I 0.731
F775_17148 Aegilops tauschii F775_17148 I 0.779
BRADI3G57867 Brachypodium distachyon BRADI3G57867 I 0.779
BRADI1G67350 Brachypodium distachyon BRADI1G67350 I 0.707
BGIOSGA011061 Oryza indica BGIOSGA011061 I 0.700
BGIOSGA022531 Oryza indica BGIOSGA022531 I 0.721
Bo5g034880 Brassica oleracea Bo5g034880 I 0.780
Bo6g004620 Brassica oleracea Bo6g004620 I 0.793
Bo6g121400 Brassica oleracea Bo6g121400 I 0.791
Bo7g059990 Brassica oleracea Bo7g059990 I 0.730
Bo8g071150 Brassica oleracea Bo8g071150 I 0.772
Bra012298 Brassica rapa Bra012298 I 0.763
Bra015660 Brassica rapa Bra015660 I 0.791
Bra016400 Brassica rapa Bra016400 I 0.772
Bra036022 Brassica rapa Bra036022 I 0.782
Bra040309 Brassica rapa Bra040309 I 0.793
BRADI1G46120 Brachypodium distachyon BRADI1G46120 I 0.771
GSMUA_Achr10G19460_001 Musa acuminata GSMUA_Achr10G19460_001 I 0.679
GSMUA_Achr10G25270_001 Musa acuminata GSMUA_Achr10G25270_001 I 0.770
OMERI06G08130 Oryza meridionalis OMERI06G08130 I 0.721
ONIVA02G33600 Oryza nivara ONIVA02G33600 I 0.779
ONIVA03G12660 Oryza nivara ONIVA03G12660 I 0.700
ONIVA06G08290 Oryza nivara ONIVA06G08290 I 0.721
OPUNC02G31280 Oryza punctata OPUNC02G31280 I 0.779
OPUNC03G11030 Oryza punctata OPUNC03G11030 I 0.700
OPUNC06G06600 Oryza punctata OPUNC06G06600 I 0.721
ORGLA03G0110800 Oryza glaberrima ORGLA03G0110800 I 0.700
ORGLA06G0065100 Oryza glaberrima ORGLA06G0065100 I 0.721
ORUFI03G11820 Oryza rufipogon ORUFI03G11820 I 0.700
OS02G0767800 Oryza sativa OS02G0767800 I 0.779
OS03G0263000 Oryza sativa OS03G0263000 I 0.700
PGSC0003DMG400000910 Solanum tuberosum PGSC0003DMG400000910 I 0.789
OMERI03G10750 Oryza meridionalis OMERI03G10750 I 0.700
OMERI02G32260 Oryza meridionalis OMERI02G32260 I 0.779
OGLUM06G07380 Oryza glumaepatula OGLUM06G07380 I 0.721
GSMUA_Achr10G30100_001 Musa acuminata GSMUA_Achr10G30100_001 I 0.768
GSMUA_Achr8G23240_001 Musa acuminata GSMUA_Achr8G23240_001 I 0.779
LPERR02G27720 Leersia perrieri LPERR02G27720 I 0.773
LPERR03G10190 Leersia perrieri LPERR03G10190 I 0.700
LPERR06G06370 Leersia perrieri LPERR06G06370 I 0.779
MLOC_70931 Hordeum vulgare MLOC_70931 I 0.769
MTR_3g072610 Medicago truncatula MTR_3g072610 I 0.793
MTR_5g058470 Medicago truncatula MTR_5g058470 I 0.793
OB03G21640 Oryza brachyantha OB03G21640 I 0.692
OBART03G11470 Oryza barthii OBART03G11470 I 0.700
OBART06G07000 Oryza barthii OBART06G07000 I 0.721
OGLUM02G34320 Oryza glumaepatula OGLUM02G34320 I 0.779
OGLUM03G11430 Oryza glumaepatula OGLUM03G11430 I 0.700
POPTR_0002s08610 Populus trichocarpa POPTR_0002s08610 I 0.793