Pm000004 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm000004 T006545_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.781 0.941
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.781 0.941
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm000004 AP2 31 82

Links

Other AP2 family TFs
Other Prunus mume TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000525933 Malus domestica MDP0000525933 I 0.827
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.827
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.798
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.794
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.794
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.794
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.794
Cla012318 Citrullus lanatus Cla012318 I 0.793
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.793
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.781
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.781
30084.m000185 Ricinus communis 30084.m000185 I 0.781
TCM_040015 Theobroma cacao TCM_040015 I 0.781
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.781
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.781
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.781
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.781
OS07G0204000 Oryza sativa OS07G0204000 I 0.781
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.781
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.781
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.781
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.781
Bo2g018360 Brassica oleracea Bo2g018360 I 0.781
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.781
OBART07G06690 Oryza barthii OBART07G06690 I 0.781
OB07G15030 Oryza brachyantha OB07G15030 I 0.781
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.781
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.781
Bo3g013830 Brassica oleracea Bo3g013830 I 0.781
Bra020063 Brassica rapa Bra020063 I 0.781
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.781
Bo9g152440 Brassica oleracea Bo9g152440 I 0.781
Bra006518 Brassica rapa Bra006518 I 0.781
Bra002262 Brassica rapa Bra002262 I 0.781
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.780
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.780
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.780
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.780
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.780
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.780
MDP0000177547 Malus domestica MDP0000177547 I 0.780
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.780
Pm025326 Prunus mume Pm025326 I 0.780
Ca_08232 Cicer arietinum Ca_08232 I 0.780
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.780
TCM_025913 Theobroma cacao TCM_025913 I 0.780
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.780
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.780
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.780
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.778
Si033237m.g Setaria italica Si033237m.g I 0.778
mgf022665m Mimulus guttatus mgf022665m I 0.777
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.777
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.777
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.776
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.776
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.775
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.774
TCM_011632 Theobroma cacao TCM_011632 I 0.773
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.773
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.772
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.772
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.771
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.771
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.767
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.755
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.755
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.754
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.753
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.750
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.748
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.748
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.748
Cla010474 Citrullus lanatus Cla010474 I 0.748
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.748
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.748
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.748
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.748
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.748
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.748
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.748
Si024417m.g Setaria italica Si024417m.g I 0.748
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.748
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.745
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.745
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.745
TCM_018659 Theobroma cacao TCM_018659 I 0.745
Si038848m.g Setaria italica Si038848m.g I 0.745
Ca_10494 Cicer arietinum Ca_10494 I 0.745
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.745
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.745
OBART12G17080 Oryza barthii OBART12G17080 I 0.745
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.745
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.745
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.745
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.745
F775_02727 Aegilops tauschii F775_02727 I 0.745
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.745
29635.m000461 Ricinus communis 29635.m000461 I 0.745
PK13330.1 Cannabis sativa PK13330.1 I 0.745
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.745
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.745
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.745
Pm015931 Prunus mume Pm015931 I 0.745
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.745
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.745
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.745
OS12G0582900 Oryza sativa OS12G0582900 I 0.745
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.745
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.745
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.745
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.745
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.745
MDP0000551969 Malus domestica MDP0000551969 I 0.745
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.745
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.745
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.745
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.745
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.745
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.745
MDP0000276536 Malus domestica MDP0000276536 I 0.745
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.744
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.744
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.744
29813.m001543 Ricinus communis 29813.m001543 I 0.744
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.743
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.743
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.743
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.741
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.740
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.740
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.738
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.736
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.735
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.734
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.734
mgf022810m Mimulus guttatus mgf022810m I 0.734
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.734
mgf023693m Mimulus guttatus mgf023693m I 0.734
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.733
MDP0000172804 Malus domestica MDP0000172804 I 0.732
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.732
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.732
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.728
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.727
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.727
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.725
PK25269.1 Cannabis sativa PK25269.1 I 0.724
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.722
30174.m009031 Ricinus communis 30174.m009031 I 0.722
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.721
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.717
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.717
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.717
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.716
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.716
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.716
Cla021590 Citrullus lanatus Cla021590 I 0.716
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.715
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.715
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.715
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.715
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.715
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.714
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.713
MDP0000138669 Malus domestica MDP0000138669 I 0.713
TCM_005425 Theobroma cacao TCM_005425 I 0.713
MDP0000128326 Malus domestica MDP0000128326 I 0.713
Pm008788 Prunus mume Pm008788 I 0.713
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.713
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.713
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.713
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.713
mgf018851m Mimulus guttatus mgf018851m I 0.713
MDP0000133476 Malus domestica MDP0000133476 I 0.713
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.713
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.713
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.713
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.713
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.713
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.712
Si032213m.g Setaria italica Si032213m.g I 0.712
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.711
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.710
30174.m008961 Ricinus communis 30174.m008961 I 0.709
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.709
OB09G23520 Oryza brachyantha OB09G23520 I 0.708
Ca_25424 Cicer arietinum Ca_25424 I 0.708
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.708
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.707
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.707
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.707
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.707
Si030686m.g Setaria italica Si030686m.g I 0.707
F775_04303 Aegilops tauschii F775_04303 I 0.707
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.706
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.706
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.706
Eucgr.B00666 Eucalyptus grandis Eucgr.B00666 I 0.706
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.706
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.705
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.705
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.705
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.705
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.705
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.705
OBART07G19610 Oryza barthii OBART07G19610 I 0.705
OS07G0575000 Oryza sativa OS07G0575000 I 0.705
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.705
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.705
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.705
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.705
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.704
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.699
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.699
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.697
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.695
Pm030235 Prunus mume Pm030235 I 0.694
MDP0000157628 Malus domestica MDP0000157628 I 0.694
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.694
MDP0000197375 Malus domestica MDP0000197375 I 0.694
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.693
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.693
Ca_16397 Cicer arietinum Ca_16397 I 0.693
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.693
TCM_014471 Theobroma cacao TCM_014471 I 0.692
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.692
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.690
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.689
TCM_015579 Theobroma cacao TCM_015579 I 0.689
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.689
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.689
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.687
Ca_00417 Cicer arietinum Ca_00417 I 0.686
POPTR_0013s05330 Populus trichocarpa POPTR_0013s05330 I 0.685
GLYMA02G08020 Glycine max GLYMA02G08020 I 0.684
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.684
Si027288m.g Setaria italica Si027288m.g I 0.684
GLYMA16G27040 Glycine max GLYMA16G27040 I 0.684
30068.m002623 Ricinus communis 30068.m002623 I 0.683
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.683
POPTR_0019s05170 Populus trichocarpa POPTR_0019s05170 I 0.679