Pm003634 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm003634 T006554_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.750 0.878
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.734 0.857
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.734 0.857
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.734 0.857
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.728 0.857
PK08602.1
M01098_2.00
Cannabis sativa
NYCACCGCYN

NRGCGGTGRN
PBM
Lambert et al.(2019)
pTH11421
0.697 0.776
DREB2F
M06630_2.00
Arabidopsis thaliana
YCDCCRCCGCY

RGCGGYGGHGR
Dap-seq
OMalley et al.(2016)
AT3G57600_col_a
0.679 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm003634 AP2 88 139

Links

Other AP2 family TFs
Other Prunus mume TFs

225 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27810.m000639 Ricinus communis 27810.m000639 I 0.688
29680.m001737 Ricinus communis 29680.m001737 I 0.717
29729.m002292 Ricinus communis 29729.m002292 I 0.716
30170.m014115 Ricinus communis 30170.m014115 I 0.727
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.700
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.695
Aquca_004_00452 Aquilegia coerulea Aquca_004_00452 I 0.692
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.697
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.694
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.684
DREB2D Arabidopsis thaliana AT1G75490 D 0.734
AT2G40350 Arabidopsis thaliana AT2G40350 I 0.685
DREB2F Arabidopsis thaliana AT3G57600 D 0.679
DREB2G Arabidopsis thaliana AT5G18450 D 0.750
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.679
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.690
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.696
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.696
Bo2g016490 Brassica oleracea Bo2g016490 I 0.730
Bo2g083920 Brassica oleracea Bo2g083920 I 0.736
Bo3g013160 Brassica oleracea Bo3g013160 I 0.707
Bo4g190040 Brassica oleracea Bo4g190040 I 0.692
Bo6g086320 Brassica oleracea Bo6g086320 I 0.731
Bo6g119660 Brassica oleracea Bo6g119660 I 0.734
Bo8g092010 Brassica oleracea Bo8g092010 I 0.680
Bo9g155940 Brassica oleracea Bo9g155940 I 0.750
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.679
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.750
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.734
Bra002159 Brassica rapa Bra002159 I 0.750
Bra003752 Brassica rapa Bra003752 I 0.731
Bra006460 Brassica rapa Bra006460 I 0.707
Bra007341 Brassica rapa Bra007341 I 0.680
Bra008200 Brassica rapa Bra008200 I 0.736
Bra015840 Brassica rapa Bra015840 I 0.734
Bra017011 Brassica rapa Bra017011 I 0.692
Bra023674 Brassica rapa Bra023674 I 0.730
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.690
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.682
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.679
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.744
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.734
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.744
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.679
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.734
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.688
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.729
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.720
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.688
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.727
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.726
Ca_07264 Cicer arietinum Ca_07264 I 0.688
Ca_10770 Cicer arietinum Ca_10770 I 0.729
Ca_12446 Cicer arietinum Ca_12446 I 0.703
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.695
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.727
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.688
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.711
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.689
Cla006713 Citrullus lanatus Cla006713 I 0.733
Cla021113 Citrullus lanatus Cla021113 I 0.731
Cla022803 Citrullus lanatus Cla022803 I 0.693
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.734
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.693
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.679
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.732
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.698
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.696
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.703
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.715
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.726
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.746
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.690
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.730
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.700
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.734
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.679
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.697
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.735
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.777
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.694
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.688
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.690
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.692
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.688
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.729
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.729
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.681
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.690
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.692
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.732
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.684
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.732
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.688
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.729
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.750
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.681
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.729
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.725
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.693
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.693
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.704
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.690
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.690
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.721
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.707
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.678
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.680
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.717
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.722
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.705
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.727
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.729
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.683
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.684
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.692
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.681
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.706
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.697
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.700
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.690
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.690
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.712
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.683
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.697
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.683
MDP0000141335 Malus domestica MDP0000141335 I 0.732
MDP0000147009 Malus domestica MDP0000147009 I 0.697
MDP0000153866 Malus domestica MDP0000153866 I 0.677
MDP0000165880 Malus domestica MDP0000165880 I 0.693
MDP0000250924 Malus domestica MDP0000250924 I 0.732
MDP0000250927 Malus domestica MDP0000250927 I 0.722
MDP0000290585 Malus domestica MDP0000290585 I 0.699
MDP0000295902 Malus domestica MDP0000295902 I 0.732
MDP0000446783 Malus domestica MDP0000446783 I 0.697
MDP0000703626 Malus domestica MDP0000703626 I 0.681
MDP0000871361 Malus domestica MDP0000871361 I 0.681
mgf007881m Mimulus guttatus mgf007881m I 0.704
mgf017629m Mimulus guttatus mgf017629m I 0.731
mgf024545m Mimulus guttatus mgf024545m I 0.720
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.729
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.695
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.688
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.696
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.688
OB01G13930 Oryza brachyantha OB01G13930 I 0.679
OB08G30790 Oryza brachyantha OB08G30790 I 0.696
OBART01G04210 Oryza barthii OBART01G04210 I 0.679
OBART03G05550 Oryza barthii OBART03G05550 I 0.690
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.679
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.690
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.696
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.679
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.679
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.690
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.696
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.679
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.690
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.696
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.679
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.690
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.696
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.689
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.727
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.688
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.679
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.696
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.679
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.690
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.696
DREB2A Oryza sativa OS01G0165000 I 0.679
DREB2E Oryza sativa OS03G0174400 I 0.690
DREB2C Oryza sativa OS08G0565200 I 0.696
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.690
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.690
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.705
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.688
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.721
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.752
PK07402.1 Cannabis sativa PK07402.1 D 0.728
PK07829.1 Cannabis sativa PK07829.1 I 0.689
PK08602.1 Cannabis sativa PK08602.1 D 0.697
Pm006274 Prunus mume Pm006274 I 0.732
Pm015262 Prunus mume Pm015262 I 0.700
Pm018989 Prunus mume Pm018989 I 0.691
Pm025865 Prunus mume Pm025865 I 0.681
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.726
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.724
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.699
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.719
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.728
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.688
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.691
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.681
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.700
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.724
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.786
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.688
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.693
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.729
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.713
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.730
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.713
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.730
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.700
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.708
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.750
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.714
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.714
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.752
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.721
TCM_024756 Theobroma cacao TCM_024756 I 0.688
TCM_026121 Theobroma cacao TCM_026121 I 0.707
TCM_034132 Theobroma cacao TCM_034132 I 0.724
TCM_043275 Theobroma cacao TCM_043275 I 0.692
TCM_043302 Theobroma cacao TCM_043302 I 0.694
TCM_043306 Theobroma cacao TCM_043306 I 0.694
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.679
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.750
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.702
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.734
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.698
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.688
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.717
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.727