Pm018354 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm018354 T006606_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF023
M06560_2.00
Arabidopsis thaliana
DYCACCGACANHDNN

NNHDNTGTCGGTGRH
Dap-seq
OMalley et al.(2016)
AT1G01250_col_a
0.807 0.940
ERF023
M06561_2.00
Arabidopsis thaliana
HHNHHDHCACCGACA

TGTCGGTGDHDDNDD
Dap-seq
OMalley et al.(2016)
AT1G01250_colamp_a
0.807 0.940
estExt_fgenesh1_pg.C_4800009
M01639_2.00
Physcomitrella patens
MACCGACM

KGTCGGTK
PBM
Weirauch et al.(2014)
pTH8488
0.687 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm018354 AP2 37 88

Links

Other AP2 family TFs
Other Prunus mume TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRUPE_ppa026139mg Prunus persica PRUPE_ppa026139mg I 0.837
gene19141-v1.0-hybrid Fragaria vesca gene19141-v1.0-hybrid I 0.833
MTR_7g117690 Medicago truncatula MTR_7g117690 I 0.833
PK15554.1 Cannabis sativa PK15554.1 I 0.833
SapurV1A.0003s1030 Salix purpurea SapurV1A.0003s1030 I 0.833
chr1.LjT43L07.200.nd Lotus japonicus chr1.LjT43L07.200.nd I 0.833
POPTR_0014s09540 Populus trichocarpa POPTR_0014s09540 I 0.829
29742.m001400 Ricinus communis 29742.m001400 I 0.829
Ciclev10022410m.g Citrus clementina Ciclev10022410m.g I 0.823
GLYMA19G44580 Glycine max GLYMA19G44580 I 0.823
orange1.1g029627m.g Citrus sinensis orange1.1g029627m.g I 0.823
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I 0.820
TCM_005130 Theobroma cacao TCM_005130 I 0.820
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I 0.820
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I 0.820
Gorai.008G126000 Gossypium raimondii Gorai.008G126000 I 0.820
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I 0.820
GLYMA03G41910 Glycine max GLYMA03G41910 I 0.814
mgf020568m Mimulus guttatus mgf020568m I 0.812
GLYMA16G02680 Glycine max GLYMA16G02680 I 0.809
ERF023 Arabidopsis thaliana AT1G01250 D 0.807
Carubv10010347m.g Capsella rubella Carubv10010347m.g I 0.807
Cagra.1968s0069 Capsella grandiflora Cagra.1968s0069 I 0.807
fgenesh2_kg.1__103__AT1G01250.1 Arabidopsis lyrata fgenesh2_kg.1__103__AT1G01250.1 I 0.807
Ca_17638 Cicer arietinum Ca_17638 I 0.805
GLYMA07G06080 Glycine max GLYMA07G06080 I 0.805
Bra032630 Brassica rapa Bra032630 I 0.803
Ca_01325 Cicer arietinum Ca_01325 I 0.803
Bostr.5325s0047 Boechera stricta Bostr.5325s0047 I 0.801
MTR_8g027465 Medicago truncatula MTR_8g027465 I 0.801
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I 0.799
Gorai.007G109400 Gossypium raimondii Gorai.007G109400 I 0.796
Thhalv10009402m.g Eutrema salsugineum Thhalv10009402m.g I 0.794
Bra033274 Brassica rapa Bra033274 I 0.794
Bo5g002600 Brassica oleracea Bo5g002600 I 0.794
Bo8g117810 Brassica oleracea Bo8g117810 I 0.790
cassava43608.valid.m1 Manihot esculenta cassava43608.valid.m1 I 0.785
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.754
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.688
estExt_fgenesh1_pg.C_4800009 Physcomitrella patens estExt_fgenesh1_pg.C_4800009 D 0.687
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.687
PGSC0003DMG400007036 Solanum tuberosum PGSC0003DMG400007036 N 0.682
cassava32974.m1 Manihot esculenta cassava32974.m1 I 0.682
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.678
Cla012665 Citrullus lanatus Cla012665 I 0.678