Pm018608 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm018608 T006608_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TOE2
M00851_2.00
Arabidopsis thaliana
NNNNTACGAGGWN

NWCCTCGTANNNN
PBM
Franco-Zorrilla et al.(2014)
TOE2
0.830 0.958
SMZ
M08402_2.00
Arabidopsis thaliana
YCTCGTAC

GTACGAGR
ChIP-chip
Mathelier et al.(2014)
MA0553.1
0.821 0.958
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm018608 AP2 175 224

Links

Other AP2 family TFs
Other Prunus mume TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMAM001294 Anopheles maculatus AMAM001294 N 0.000
53467 Aureococcus anophagefferens 53467 N 0.000
AFP65672.1 Chroomonas mesostigmatica AFP65672.1 N 0.000
D915_15351 Fasciola hepatica D915_15351 N 0.000
estExt_Genewise1Plus.C_60358 Fragilariopsis cylindrus estExt_Genewise1Plus.C_60358 N 0.000
ABW97889.1 Hemiselmis andersenii ABW97889.1 N 0.000
estExt_fgenesh1_pg.C_280046 Physcomitrella patens estExt_fgenesh1_pg.C_280046 N 0.000
estExt_Genewise1.C_340313 Physcomitrella patens estExt_Genewise1.C_340313 N 0.000
estExt_fgenesh1_pg.C_620010 Phytophthora capsici estExt_fgenesh1_pg.C_620010 N 0.000
L893_g4508 Steinernema glaseri L893_g4508 N 0.000
Thaps33682 Thalassiosira pseudonana Thaps33682 N 0.000