Pm023769 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm023769 T006631_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.741 0.769
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.741 0.769
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.737 0.750
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.737 0.750
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.737 0.750
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.737 0.750
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.730 0.750
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.730 0.750
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.730 0.750
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.730 0.750
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.730 0.750
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.730 0.750
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.708 0.712
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.708 0.712
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.702 0.712
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.702 0.712
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.702 0.712
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.692 0.712
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm023769 AP2 59 111

Links

Other AP2 family TFs
Other Prunus mume TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.881
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.841
Pm023775 Prunus mume Pm023775 I 0.841
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.839
MDP0000154764 Malus domestica MDP0000154764 I 0.838
MDP0000198054 Malus domestica MDP0000198054 I 0.832
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.829
Pm023772 Prunus mume Pm023772 I 0.817
Cla011674 Citrullus lanatus Cla011674 I 0.813
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.810
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.803
TCM_016175 Theobroma cacao TCM_016175 I 0.795
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.793
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.791
30190.m011120 Ricinus communis 30190.m011120 I 0.789
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.788
60638.m00016 Ricinus communis 60638.m00016 I 0.782
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.779
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.779
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.779
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.777
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.775
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.773
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.772
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.772
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.772
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.771
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.769
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.769
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.769
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.769
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.769
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.769
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.768
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.766
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.766
mgf026642m Mimulus guttatus mgf026642m I 0.766
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.766
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.765
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.764
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.763
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.763
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.763
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.762
Cla006315 Citrullus lanatus Cla006315 I 0.762
mgf019061m Mimulus guttatus mgf019061m I 0.760
PK23332.1 Cannabis sativa PK23332.1 I 0.760
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.760
mgf017136m Mimulus guttatus mgf017136m I 0.757
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.753
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.753
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.753
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.753
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.751
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.750
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.749
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.747
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.747
30147.m014313 Ricinus communis 30147.m014313 I 0.746
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.745
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.744
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.743
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.743
DREB1D Arabidopsis thaliana AT5G51990 D 0.741
Bra028290 Brassica rapa Bra028290 I 0.741
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.741
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.741
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.741
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.741
Bo9g104770 Brassica oleracea Bo9g104770 I 0.741
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.741
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.738
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.738
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.737
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.737
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.737
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.737
DREB1A Arabidopsis thaliana AT4G25480 D 0.737
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.737
Bra016763 Brassica rapa Bra016763 I 0.736
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.736
Bo01335s010 Brassica oleracea Bo01335s010 I 0.736
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.735
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.735
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.734
30190.m011119 Ricinus communis 30190.m011119 I 0.733
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.733
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.732
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.732
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.732
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.731
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.730
DREB1F Arabidopsis thaliana AT1G12610 D 0.730
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.730
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.728
Cla002362 Citrullus lanatus Cla002362 I 0.728
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.728
Bo8g108050 Brassica oleracea Bo8g108050 I 0.727
Bra026963 Brassica rapa Bra026963 I 0.727
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.727
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.725
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.725
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.725
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.724
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.722
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.722
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.721
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.721
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.721
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.721
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.721
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.719
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.719
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.719
Ca_08732 Cicer arietinum Ca_08732 I 0.717
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.717
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.717
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.716
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.715
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.715
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.715
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.714
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.713
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.713
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.713
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.710
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.710
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.710
mgf026339m Mimulus guttatus mgf026339m I 0.709
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.708
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.708
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.708
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.708
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.708
OBART02G27760 Oryza barthii OBART02G27760 I 0.708
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.708
DREB1G Oryza indica BGIOSGA008804 I 0.708
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.708
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.708
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.708
DREB1G Oryza sativa OS02G0677300 D 0.708
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.708
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.706
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.706
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.706
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.706
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.706
Pm023777 Prunus mume Pm023777 N 0.702
DREB1C Arabidopsis thaliana AT4G25470 D 0.702
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.701
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.701
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.699
Si018262m.g Setaria italica Si018262m.g I 0.698
MTR_5g010910 Medicago truncatula MTR_5g010910 N 0.696
MTR_5g010940 Medicago truncatula MTR_5g010940 N 0.696
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.695
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.692
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.692
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.692
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.692
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.690
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.690
Ca_18948 Cicer arietinum Ca_18948 I 0.683
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.683
MTR_6g465850 Medicago truncatula MTR_6g465850 I 0.683
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.681
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.679
Bo5g016750 Brassica oleracea Bo5g016750 I 0.678
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.677
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.677