Pm023775 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm023775 T006634_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.756 0.824
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.756 0.824
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.752 0.804
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.752 0.804
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.752 0.804
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.752 0.804
DREB1F
M00962_2.00
Arabidopsis thaliana
NRCCGACNN

NNGTCGGYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana
0.732 0.765
DREB1F
M00840_2.00
Arabidopsis thaliana
NRYCGACNN

NNGTCGRYN
PBM
Franco-Zorrilla et al.(2014)
DDF1
0.732 0.765
DDF1
M00964_2.00
Arabidopsis lyrata
NRYCGACDY

RHGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata
0.732 0.765
DREB1F
M06564_2.00
Arabidopsis thaliana
NHNHYGYCGACATNN

NNATGTCGRCRDNDN
Dap-seq
OMalley et al.(2016)
DDF1_col_a
0.732 0.765
DREB1F
M06565_2.00
Arabidopsis thaliana
HNDNNRYCGACAH

DTGTCGRYNNHND
Dap-seq
OMalley et al.(2016)
DDF1_colamp_a
0.732 0.765
DREB1F
M09701_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1F_03
0.732 0.765
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.717 0.765
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.717 0.765
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.717 0.765
DREB1G
M01635_2.00
Oryza sativa
NYGCCGACAN

NTGTCGGCRN
PBM
Weirauch et al.(2014)
pTH8352
0.708 0.725
DREB1G
M09707_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1G_01
0.708 0.725
ddf2
M00965_2.00
Arabidopsis lyrata
NRYCGACAT

ATGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata
0.700 0.725
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm023775 AP2 57 109

Links

Other AP2 family TFs
Other Prunus mume TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30147.m014313 Ricinus communis 30147.m014313 I 0.761
30190.m011119 Ricinus communis 30190.m011119 I 0.747
30190.m011120 Ricinus communis 30190.m011120 I 0.804
60638.m00016 Ricinus communis 60638.m00016 I 0.784
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.691
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.749
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.752
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.758
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.768
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.696
Aquca_122_00013 Aquilegia coerulea Aquca_122_00013 I 0.684
DREB1F Arabidopsis thaliana AT1G12610 D 0.732
DREB1C Arabidopsis thaliana AT4G25470 D 0.717
DREB1A Arabidopsis thaliana AT4G25480 D 0.752
DREB1D Arabidopsis thaliana AT5G51990 D 0.756
DREB1G Oryza indica BGIOSGA008804 I 0.708
Bo01335s010 Brassica oleracea Bo01335s010 I 0.738
Bo5g016750 Brassica oleracea Bo5g016750 I 0.686
Bo8g108050 Brassica oleracea Bo8g108050 I 0.729
Bo9g104770 Brassica oleracea Bo9g104770 I 0.756
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.722
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.756
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.700
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.752
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.778
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.752
Bra016763 Brassica rapa Bra016763 I 0.738
Bra026963 Brassica rapa Bra026963 I 0.729
Bra028290 Brassica rapa Bra028290 I 0.756
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.713
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.756
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.724
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.781
Cagra.23885s0001 Capsella grandiflora Cagra.23885s0001 I 0.682
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.752
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.752
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.745
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.724
Carubv10021910m.g Capsella rubella Carubv10021910m.g I 0.682
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.756
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.775
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.759
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.787
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.790
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.734
Ca_04504 Cicer arietinum Ca_04504 I 0.678
Ca_08732 Cicer arietinum Ca_08732 I 0.742
Ca_18948 Cicer arietinum Ca_18948 I 0.698
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.692
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.721
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.783
Cla002362 Citrullus lanatus Cla002362 I 0.743
Cla006315 Citrullus lanatus Cla006315 I 0.777
Cla011674 Citrullus lanatus Cla011674 I 0.828
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.721
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.779
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.803
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.728
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.677
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.677
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.677
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.677
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.817
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.777
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.707
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.781
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.732
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.700
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.745
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.775
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.824
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.706
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.736
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.788
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.728
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.715
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.715
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.750
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.736
GLYMA16G32330 Glycine max GLYMA16G32330 I 0.689
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.747
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.721
Gorai.003G162700 Gossypium raimondii Gorai.003G162700 I 0.679
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.735
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.787
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.854
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.708
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.780
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.750
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.782
LjSGA_077560.1 Lotus japonicus LjSGA_077560.1 N 0.677
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.708
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.771
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.771
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.771
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.793
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.687
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.771
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.771
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.692
MDP0000154764 Malus domestica MDP0000154764 I 0.873
MDP0000198054 Malus domestica MDP0000198054 I 0.867
mgf017136m Mimulus guttatus mgf017136m I 0.772
mgf019061m Mimulus guttatus mgf019061m I 0.760
mgf026339m Mimulus guttatus mgf026339m I 0.724
mgf026642m Mimulus guttatus mgf026642m I 0.781
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.713
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.694
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.730
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.733
MTR_5g010910 Medicago truncatula MTR_5g010910 N 0.701
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.748
MTR_5g010940 Medicago truncatula MTR_5g010940 N 0.701
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.715
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.715
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.715
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.725
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.740
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.713
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.736
MTR_6g465850 Medicago truncatula MTR_6g465850 I 0.698
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.736
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.764
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.716
OBART02G27760 Oryza barthii OBART02G27760 I 0.708
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.708
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.708
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.708
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.708
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.740
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.721
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.784
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.708
DREB1G Oryza sativa OS02G0677300 D 0.708
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.708
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.708
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.777
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.752
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.784
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.715
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.739
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.736
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.732
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.698
PK23332.1 Cannabis sativa PK23332.1 I 0.775
Pm019386 Prunus mume Pm019386 I 0.682
Pm023769 Prunus mume Pm023769 I 0.841
Pm023772 Prunus mume Pm023772 I 0.842
Pm023777 Prunus mume Pm023777 N 0.737
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.768
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.794
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.721
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.743
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.787
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.781
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.876
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.854
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.762
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.780
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.818
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.841
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.747
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.766
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.743
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.794
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.747
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.765
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.708
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.756
Si018262m.g Setaria italica Si018262m.g I 0.698
Solyc01g009440.1 Solanum lycopersicum Solyc01g009440.1 I 0.688
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.753
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.751
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.748
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.758
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.724
Solyc12g056430.1 Solanum lycopersicum Solyc12g056430.1 I 0.690
TCM_016175 Theobroma cacao TCM_016175 I 0.810
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.735
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.756
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.700
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.778
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.806
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.714
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.753
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.752