Pm023775 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm023775 T006634_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.756 0.824
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.756 0.824
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.752 0.804
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.752 0.804
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.752 0.804
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.752 0.804
DREB1F
M00962_2.00
Arabidopsis thaliana
NRCCGACNN

NNGTCGGYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana
0.732 0.765
DREB1F
M00840_2.00
Arabidopsis thaliana
NRYCGACNN

NNGTCGRYN
PBM
Franco-Zorrilla et al.(2014)
DDF1
0.732 0.765
DDF1
M00964_2.00
Arabidopsis lyrata
NRYCGACDY

RHGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata
0.732 0.765
DREB1F
M06564_2.00
Arabidopsis thaliana
NHNHYGYCGACATNN

NNATGTCGRCRDNDN
Dap-seq
OMalley et al.(2016)
DDF1_col_a
0.732 0.765
DREB1F
M06565_2.00
Arabidopsis thaliana
HNDNNRYCGACAH

DTGTCGRYNNHND
Dap-seq
OMalley et al.(2016)
DDF1_colamp_a
0.732 0.765
DREB1F
M09701_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1F_03
0.732 0.765
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.717 0.765
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.717 0.765
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.717 0.765
DREB1G
M01635_2.00
Oryza sativa
NYGCCGACAN

NTGTCGGCRN
PBM
Weirauch et al.(2014)
pTH8352
0.708 0.725
DREB1G
M09707_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1G_01
0.708 0.725
ddf2
M00965_2.00
Arabidopsis lyrata
NRYCGACAT

ATGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata
0.700 0.725
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm023775 AP2 57 109

Links

Other AP2 family TFs
Other Prunus mume TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANIA_04077 Aspergillus nidulans CADANIAG00004604 I 0.000
A1O1_01039 Capronia coronata A1O1_01039 N 0.000
A1O3_07515 Capronia epimyces A1O3_07515 N 0.000
PV04_02016 Capronia semiimmersa PV04_02016 N 0.000
Z519_03501 Cladophialophora bantiana Z519_03501 N 0.000
G647_00094 Cladophialophora carrionii G647_00094 N 0.000
PV07_12748 Cladophialophora immunda PV07_12748 N 0.000
PV07_10758 Cladophialophora immunda PV07_10758 N 0.000
A1O5_04221 Cladophialophora psammophila A1O5_04221 N 0.000
A1O7_00084 Cladophialophora yegresii A1O7_00084 N 0.000
HMPREF1541_09623 Cyphellophora europaea HMPREF1541_09623 N 0.000
A1O9_13137 Exophiala aquamarina A1O9_13137 N 0.000
PV10_09038 Exophiala mesophila PV10_09038 N 0.000
PV06_03658 Exophiala oligosperma PV06_03658 N 0.000
PV08_06067 Exophiala spinifera PV08_06067 N 0.000
PV05_10912 Exophiala xenobiotica PV05_10912 N 0.000
Z517_08888 Fonsecaea pedrosoi Z517_08888 N 0.000
Pc18g02200 Penicillium chrysogenum Pc18g02200 I 0.000
PEX1_076370 Penicillium expansum PEX1_076370 I 0.000
PITC_027910 Penicillium italicum PITC_027910 I 0.000
PCH_Pc18g02200 Penicillium rubens PCH_Pc18g02200 I 0.000
U727_00431293291 Penicillium solitum U727_00431293291 I 0.000
Z518_07944 Rhinocladiella mackenziei Z518_07944 N 0.000