27805.m000021 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 27805.m000021 T006676_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF021
M06593_2.00
Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD

HGDCGGYGRHGRHGRHGRND
Dap-seq
OMalley et al.(2016)
AT1G71450_col_a
0.712 0.780
ERF021
M06594_2.00
Arabidopsis thaliana
NHNNCRCCGHCDH

DHGDCGGYGNNDN
Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a
0.712 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
27805.m000021 AP2 16 67

Links

Other AP2 family TFs
Other Ricinus communis TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_036270 Theobroma cacao TCM_036270 I 0.789
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.786
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.778
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.778
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.778
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.778
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.774
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.772
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.770
Bra010210 Brassica rapa Bra010210 I 0.759
Bo5g086680 Brassica oleracea Bo5g086680 I 0.756
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.755
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.755
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.754
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.754
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.754
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.749
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.747
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.746
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.746
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.746
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.745
Pm004272 Prunus mume Pm004272 I 0.744
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.744
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.743
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.740
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.740
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.740
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.740
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.740
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.740
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.740
Pm004269 Prunus mume Pm004269 I 0.740
Cla012665 Citrullus lanatus Cla012665 I 0.739
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.738
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.738
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.738
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.737
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.737
MDP0000122740 Malus domestica MDP0000122740 I 0.737
MDP0000151428 Malus domestica MDP0000151428 I 0.737
MDP0000122739 Malus domestica MDP0000122739 I 0.737
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.736
TCM_036269 Theobroma cacao TCM_036269 I 0.736
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.735
ERF022 Arabidopsis thaliana AT1G33760 I 0.734
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.734
MDP0000283350 Malus domestica MDP0000283350 I 0.734
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.732
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.732
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.731
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.730
28118.m000034 Ricinus communis 28118.m000034 I 0.729
Bo8g027240 Brassica oleracea Bo8g027240 I 0.729
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.729
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.728
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.725
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.724
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.721
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.719
Si026882m.g Setaria italica Si026882m.g I 0.718
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.717
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.717
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.712
ERF021 Arabidopsis thaliana AT1G71450 D 0.712
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.712
Bo2g072910 Brassica oleracea Bo2g072910 I 0.712
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.712
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.711
Cla012661 Citrullus lanatus Cla012661 I 0.711
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.711
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.709
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.708
F775_17299 Aegilops tauschii F775_17299 I 0.708
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.708
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.708
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.708
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.708
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.708
Bra016136 Brassica rapa Bra016136 I 0.706
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.705
Bo6g113020 Brassica oleracea Bo6g113020 I 0.704
Bra028009 Brassica rapa Bra028009 I 0.703
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.702
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.700
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.699
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.699
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.698
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.698
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.698
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.698
OB11G16300 Oryza brachyantha OB11G16300 I 0.698
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.698
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.698
OS11G0242300 Oryza sativa OS11G0242300 I 0.698
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.698
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.698
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.698
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.698
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.698
Bo6g046850 Brassica oleracea Bo6g046850 I 0.697
Bra007975 Brassica rapa Bra007975 I 0.697
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.695
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.695
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.695
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.693
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.693
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.690
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.690
Bo6g094210 Brassica oleracea Bo6g094210 I 0.677
Bra003924 Brassica rapa Bra003924 I 0.677