29729.m002292 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 29729.m002292 T006709_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.766 0.898
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.714 0.837
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.707 0.816
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.690 0.816
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.687 0.857
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.687 0.857
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.680 0.776
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.680 0.776
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.680 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29729.m002292 AP2 80 131

Links

Other AP2 family TFs
Other Ricinus communis TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.802
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.800
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.795
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.785
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.785
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.782
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.782
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.778
PK07402.1 Cannabis sativa PK07402.1 D 0.766
Bo4g190040 Brassica oleracea Bo4g190040 I 0.759
Bra017011 Brassica rapa Bra017011 I 0.759
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.759
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.759
Cla006713 Citrullus lanatus Cla006713 I 0.758
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.755
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.755
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.755
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.754
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.751
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.751
MDP0000147009 Malus domestica MDP0000147009 I 0.747
MDP0000446783 Malus domestica MDP0000446783 I 0.747
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.747
MDP0000165880 Malus domestica MDP0000165880 I 0.746
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.745
Pm018989 Prunus mume Pm018989 I 0.745
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.745
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.744
Pm015262 Prunus mume Pm015262 I 0.737
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.737
TCM_043275 Theobroma cacao TCM_043275 I 0.736
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.734
MDP0000290585 Malus domestica MDP0000290585 I 0.733
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.733
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.731
Si002067m.g Setaria italica Si002067m.g I 0.731
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.730
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.726
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.725
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.725
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.725
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.724
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.723
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.722
TCM_043302 Theobroma cacao TCM_043302 I 0.721
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.721
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.721
TCM_043306 Theobroma cacao TCM_043306 I 0.721
MDP0000153866 Malus domestica MDP0000153866 I 0.720
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.720
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.719
DREB2A Oryza sativa OS01G0165000 I 0.719
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.719
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.719
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.719
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.719
OB01G13930 Oryza brachyantha OB01G13930 I 0.719
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.719
OBART01G04210 Oryza barthii OBART01G04210 I 0.719
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.719
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.719
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.719
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.718
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.717
Pm003634 Prunus mume Pm003634 I 0.716
Bo9g177130 Brassica oleracea Bo9g177130 I 0.715
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.714
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.714
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.714
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.714
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.714
F775_05774 Aegilops tauschii F775_05774 I 0.714
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.713
PK07829.1 Cannabis sativa PK07829.1 I 0.712
Cla012194 Citrullus lanatus Cla012194 I 0.710
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.710
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.708
MDP0000880312 Malus domestica MDP0000880312 I 0.708
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.707
Bra002159 Brassica rapa Bra002159 I 0.707
DREB2G Arabidopsis thaliana AT5G18450 D 0.707
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.707
Bo9g155940 Brassica oleracea Bo9g155940 I 0.707
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.707
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.706
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.706
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.705
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.705
Ca_12446 Cicer arietinum Ca_12446 I 0.705
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.705
Cucsa.130200 Cucumis sativus Cucsa.130200 I 0.704
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.704
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.704
mgf007881m Mimulus guttatus mgf007881m I 0.704
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.704
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.704
AT2G40350 Arabidopsis thaliana AT2G40350 I 0.703
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.702
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.702
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.701
MDP0000250924 Malus domestica MDP0000250924 I 0.701
Cla001755 Citrullus lanatus Cla001755 I 0.701
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.700
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.699
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.699
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.699
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.699
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.698
Aquca_004_00452 Aquilegia coerulea Aquca_004_00452 I 0.694
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.694
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.693
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.693
MDP0000250927 Malus domestica MDP0000250927 I 0.693
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.693
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.692
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.691
F775_32062 Aegilops tauschii F775_32062 I 0.691
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.691
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.691
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.691
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.691
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.691
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.691
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.691
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.691
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.691
Pm006274 Prunus mume Pm006274 I 0.691
mgf017629m Mimulus guttatus mgf017629m I 0.691
Ca_10770 Cicer arietinum Ca_10770 I 0.691
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.691
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.691
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.690
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.690
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.690
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.690
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.690
mgf024545m Mimulus guttatus mgf024545m I 0.690
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.688
Bra023674 Brassica rapa Bra023674 I 0.688
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.688
Bo2g016490 Brassica oleracea Bo2g016490 I 0.688
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.688
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.688
Cla021113 Citrullus lanatus Cla021113 I 0.688
DREB2A Arabidopsis thaliana AT5G05410 D 0.687
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.686
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.686
30170.m014115 Ricinus communis 30170.m014115 I 0.686
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.686
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.686
Bra008200 Brassica rapa Bra008200 I 0.685
Bo2g083920 Brassica oleracea Bo2g083920 I 0.685
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.685
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.685
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.685
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.685
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.685
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.685
TCM_034132 Theobroma cacao TCM_034132 I 0.684
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.683
POPTR_0006s10510 Populus trichocarpa POPTR_0006s10510 I 0.683
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.683
Si022619m.g Setaria italica Si022619m.g I 0.682
Bra003752 Brassica rapa Bra003752 I 0.680
Bo6g119660 Brassica oleracea Bo6g119660 I 0.680
Bo6g086320 Brassica oleracea Bo6g086320 I 0.680
DREB2D Arabidopsis thaliana AT1G75490 D 0.680
29680.m001737 Ricinus communis 29680.m001737 I 0.680
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.680
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.680
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.680
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.680
Bra015840 Brassica rapa Bra015840 I 0.680
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.680
MDP0000141335 Malus domestica MDP0000141335 I 0.679
MDP0000295902 Malus domestica MDP0000295902 I 0.679
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.678
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.678
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.678
Ca_22585 Cicer arietinum Ca_22585 I 0.677
Bo1g141310 Brassica oleracea Bo1g141310 I 0.677