29739.m003647 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 29739.m003647 T006711_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.788 0.920
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.788 0.920
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.769 0.860
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.769 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29739.m003647 AP2 68 119

Links

Other AP2 family TFs
Other Ricinus communis TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.808
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.808
Bo8g068370 Brassica oleracea Bo8g068370 I 0.800
Bra016518 Brassica rapa Bra016518 I 0.800
TCM_037415 Theobroma cacao TCM_037415 I 0.799
Bra002377 Brassica rapa Bra002377 I 0.797
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.797
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.797
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.797
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.797
Bo9g149820 Brassica oleracea Bo9g149820 I 0.797
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.796
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.793
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.792
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.792
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.792
ERF016 Arabidopsis thaliana AT5G21960 I 0.791
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.790
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.789
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.789
Bra006599 Brassica rapa Bra006599 I 0.789
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.789
Bo3g015600 Brassica oleracea Bo3g015600 I 0.789
ERF017 Arabidopsis thaliana AT1G19210 D 0.788
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.788
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.788
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.788
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.788
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.788
Bra020162 Brassica rapa Bra020162 I 0.786
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.786
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.786
Pm027117 Prunus mume Pm027117 I 0.785
29739.m003716 Ricinus communis 29739.m003716 I 0.785
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.785
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.780
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.780
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.780
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.780
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.779
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.779
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.779
Bo2g023630 Brassica oleracea Bo2g023630 I 0.778
Ca_01683 Cicer arietinum Ca_01683 I 0.778
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.778
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.778
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.777
mgf021940m Mimulus guttatus mgf021940m I 0.777
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.777
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.777
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.777
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.776
Bra031069 Brassica rapa Bra031069 I 0.776
Bo8g102870 Brassica oleracea Bo8g102870 I 0.776
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.775
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.775
MDP0000649022 Malus domestica MDP0000649022 I 0.774
mgf024162m Mimulus guttatus mgf024162m I 0.771
Bra003780 Brassica rapa Bra003780 I 0.770
Bo6g086740 Brassica oleracea Bo6g086740 I 0.769
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.769
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.769
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.769
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.769
ERF018 Arabidopsis thaliana AT1G74930 D 0.769
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.767
Cla007584 Citrullus lanatus Cla007584 I 0.767
Si019636m.g Setaria italica Si019636m.g I 0.767
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.766
TCM_037486 Theobroma cacao TCM_037486 I 0.765
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.765
Bo6g119120 Brassica oleracea Bo6g119120 I 0.765
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.764
MDP0000704216 Malus domestica MDP0000704216 I 0.762
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.761
Bra015882 Brassica rapa Bra015882 I 0.760
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.759
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.758
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.758
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.757
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.755
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.755
mgf025452m Mimulus guttatus mgf025452m I 0.755
Cla011318 Citrullus lanatus Cla011318 I 0.755
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.753
Ca_09124 Cicer arietinum Ca_09124 I 0.753
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.752
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.752
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.751
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.750
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.750
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.750
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.748
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.748
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.747
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.745
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.745
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.745
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.745
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.744
Ca_19295 Cicer arietinum Ca_19295 I 0.743
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.743
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.741
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.741
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.740
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.740
Ca_19297 Cicer arietinum Ca_19297 I 0.740
Cla022291 Citrullus lanatus Cla022291 I 0.740
Bra025719 Brassica rapa Bra025719 I 0.740
Ca_19296 Cicer arietinum Ca_19296 I 0.738
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.736
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.736
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.726
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.724
PK18548.1 Cannabis sativa PK18548.1 I 0.717
OS02G0781300 Oryza sativa OS02G0781300 I 0.716
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.716
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.716
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.716
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.716
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.716
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.716
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.716
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.716
Si008104m.g Setaria italica Si008104m.g I 0.715
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.713
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.709
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.706
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.703
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.700
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.696
MTR_7g028925 Medicago truncatula MTR_7g028925 I 0.684
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.683
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.683
Si015027m.g Setaria italica Si015027m.g I 0.683
OBART08G16950 Oryza barthii OBART08G16950 I 0.683
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.683
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.683
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.683
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.683
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.683
OS08G0454000 Oryza sativa OS08G0454000 I 0.683
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.683
OB08G24280 Oryza brachyantha OB08G24280 I 0.683
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.683
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.680
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.677