29908.m006165 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 29908.m006165 T006733_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD

HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.796 1.000
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC

GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.782 0.960
ERF013
M06601_2.00
Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN

NNNNNNDNHDDTGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g77640_col_a
0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29908.m006165 AP2 29 80

Links

Other AP2 family TFs
Other Ricinus communis TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MCYG_07695 Microsporum canis MCYG_07695 N 0.000
TESG_03492 Trichophyton tonsurans TESG_03492 N 0.000
MPH_00638 Macrophomina phaseolina MPH_00638 N 0.000
MGYG_05065 Microsporum gypseum MGYG_05065 N 0.000
HMPREF1120_02123 Exophiala dermatitidis HMPREF1120_02123 N 0.000
H105_06622 Trichophyton soudanense H105_06622 N 0.000
H102_06585 Trichophyton rubrum H102_06585 N 0.000
H101_01563 Trichophyton interdigitale H101_01563 N 0.000
H072_9038 Dactylellina haptotyla H072_9038 N 0.000
EURHEDRAFT_514859 Aspergillus ruber EURHEDRAFT_514859 N 0.000
ARB_06468 Arthroderma benhamiae ARB_06468 N 0.000
TRV_07088 Trichophyton verrucosum TRV_07088 N 0.000