29908.m006165 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 29908.m006165 T006733_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD

HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.796 1.000
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC

GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.782 0.960
ERF013
M06601_2.00
Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN

NNNNNNDNHDDTGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g77640_col_a
0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29908.m006165 AP2 29 80

Links

Other AP2 family TFs
Other Ricinus communis TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AOL_s00007g13 Arthrobotrys oligospora AOL_s00007g13 N 0.000
fgenesh1_pm.00118_#_302 Aspergillus carbonarius fgenesh1_pm.00118_#_302 I 0.000
CADAFLAG00009874 Aspergillus flavus CADAFLAG00009874 I 0.000
CADAORAG00000469 Aspergillus oryzae CADAORAG00000469 I 0.000
ATEG_05796 Aspergillus terreus CADATEAG00000622 I 0.000
COCMIDRAFT_48551 Bipolaris oryzae COCMIDRAFT_48551 I 0.000
COCSADRAFT_143282 Bipolaris sorokiniana COCSADRAFT_143282 I 0.000
Bcin03g00220 Botrytis cinerea Bcin03g00220 N 0.000
CaO19.10267 Candida albicans CaO19.10267 N 0.000
CaO19.2753 Candida albicans CaO19.2753 N 0.000
CD36_42070 Candida dubliniensis CD36_42070 N 0.000
CD36_42370 Candida dubliniensis CD36_42370 N 0.000
G210_1055 Candida maltosa G210_1055 N 0.000
CORT_0E01540 Candida orthopsilosis CORT_0E01540 N 0.000
CPAG_03993 Candida parapsilosis CPAG_03993 N 0.000
CTRG_00024 Candida tropicalis CTRG_00024 N 0.000
CFIO01_05979 Colletotrichum fioriniae CFIO01_05979 I 0.000
CFIO01_03929 Colletotrichum fioriniae CFIO01_03929 I 0.000
CGGC5_239 Colletotrichum gloeosporioides CGGC5_239 I 0.000
GLRG_08945 Colletotrichum graminicola GLRG_08945 I 0.000
GLRG_08912 Colletotrichum graminicola GLRG_08912 I 0.000
CH063_09531 Colletotrichum higginsianum CH063_09531 I 0.000
Cob_02505 Colletotrichum orbiculare Cob_02505 I 0.000
CSUB01_07904 Colletotrichum sublineola CSUB01_07904 I 0.000
FFUJ_05172 Fusarium fujikuroi FFUJ_05172 N 0.000
FOXG_08728 Fusarium oxysporum FOXG_08728 N 0.000
FPSE_02066 Fusarium pseudograminearum FPSE_02066 N 0.000
NechaG87897 Fusarium solani NechaG87897 N 0.000
FVEG_05935 Fusarium verticillioides FVEG_05935 N 0.000
fgenesh1_pg.sca_15_chr12_5_0000334 Nectria haematococca fgenesh1_pg.sca_15_chr12_5_0000334 N 0.000
PFICI_12506 Pestalotiopsis fici PFICI_12506 I 0.000
SPAPADRAFT_131954 Spathaspora passalidarum SPAPADRAFT_131954 N 0.000
HMPREF1624_05727 Sporothrix schenckii HMPREF1624_05727 I 0.000
VDBG_08099 Verticillium albo atrum VDBG_08099 I 0.000
VDBG_03239 Verticillium albo atrum VDBG_03239 N 0.000
VDBG_03239 Verticillium alfalfae VDBG_03239 N 0.000
VDBG_08099 Verticillium alfalfae VDBG_08099 I 0.000
VDAG_02146 Verticillium dahliae VDAG_02146 N 0.000