30147.m014311 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 30147.m014311 T006753_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G63040
M06590_2.00 		Arabidopsis thaliana
TTGAAA
TTTCAA		 Dap-seq
OMalley et al.(2016)
AT1G63040_col_a 		0.729 0.898
ERF027
M06566_2.00 		Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN
NTGTCGGYRRNDNNDNNNNNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_col_a 		0.701 0.898
ERF027
M06567_2.00 		Arabidopsis thaliana
NNYYRCCGACANHNNN
NNNDNTGTCGGYRRNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a 		0.701 0.898
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30147.m014311 AP2 54 104

Links

Other AP2 family TFs
Other Ricinus communis TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo9g036590 Brassica oleracea Bo9g036590 I 0.752
Al_scaffold_0002_210 Arabidopsis lyrata Al_scaffold_0002_210 I 0.749
Al_scaffold_0240_1 Arabidopsis lyrata Al_scaffold_0240_1 I 0.749
Bra027616 Brassica rapa Bra027616 I 0.736
Bra027615 Brassica rapa Bra027615 I 0.736
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.729
Bo9g028820 Brassica oleracea Bo9g028820 I 0.727
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.726
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.726
Aquca_013_00433 Aquilegia coerulea Aquca_013_00433 I 0.725
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.723
TCM_016176 Theobroma cacao TCM_016176 I 0.723
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.723
Cla011673 Citrullus lanatus Cla011673 I 0.721
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.720
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.720
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.718
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.717
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.717
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.716
Bostr.13671s0198 Boechera stricta Bostr.13671s0198 I 0.715
MDP0000189347 Malus domestica MDP0000189347 I 0.710
ERF027 Arabidopsis thaliana AT1G12630 D 0.701
Cla004491 Citrullus lanatus Cla004491 I 0.699
Gorai.003G162600 Gossypium raimondii Gorai.003G162600 I 0.695
Thhalv10023678m.g Eutrema salsugineum Thhalv10023678m.g I 0.682
PGSC0003DMG400012527 Solanum tuberosum PGSC0003DMG400012527 I 0.681
GLYMA10G38420 Glycine max GLYMA10G38420 I 0.681
Bra016761 Brassica rapa Bra016761 I 0.677
Bo8g064940 Brassica oleracea Bo8g064940 I 0.677