cassava16315.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava16315.m1 T006815_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava16315.m1 AP2 65 122
cassava16315.m1 AP2 164 216

Links

Other AP2 family TFs
Other Manihot esculenta TFs

288 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30069.m000440 Ricinus communis 30069.m000440 N 0.926
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.917
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.917
Pm017032 Prunus mume Pm017032 N 0.917
Bra007066 Brassica rapa Bra007066 N 0.916
Cla020765 Citrullus lanatus Cla020765 N 0.915
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.915
Bra003178 Brassica rapa Bra003178 N 0.913
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.911
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.911
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.907
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.890
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.888
Ca_17532 Cicer arietinum Ca_17532 N 0.885
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.884
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.876
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.874
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.868
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.868
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.868
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.868
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.868
Bo8g083590 Brassica oleracea Bo8g083590 I 0.868
WRI1 Arabidopsis thaliana AT3G54320 I 0.868
Si026433m.g Setaria italica Si026433m.g N 0.867
Si012026m.g Setaria italica Si012026m.g N 0.867
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.866
Bo6g067950 Brassica oleracea Bo6g067950 I 0.865
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.863
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.863
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.863
TCM_044588 Theobroma cacao TCM_044588 I 0.863
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.863
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.863
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.863
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.863
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.862
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.862
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.860
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.860
PK04008.1 Cannabis sativa PK04008.1 I 0.859
Ca_20689 Cicer arietinum Ca_20689 N 0.858
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.858
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.858
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.856
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.856
Pm013856 Prunus mume Pm013856 N 0.856
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.856
MDP0000231748 Malus domestica MDP0000231748 N 0.855
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.855
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.855
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.855
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.854
OBART09G10730 Oryza barthii OBART09G10730 N 0.854
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.854
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.854
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.854
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.854
Si030129m.g Setaria italica Si030129m.g I 0.854
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.853
MDP0000318457 Malus domestica MDP0000318457 N 0.853
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.853
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.853
MDP0000133423 Malus domestica MDP0000133423 N 0.853
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.853
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.853
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.853
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.853
TCM_038442 Theobroma cacao TCM_038442 N 0.853
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.853
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.853
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.853
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.852
OB09G17420 Oryza brachyantha OB09G17420 I 0.852
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.852
OS09G0423800 Oryza sativa OS09G0423800 I 0.852
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.852
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.852
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.852
Cla015555 Citrullus lanatus Cla015555 N 0.851
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.850
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.850
mg013664m Mimulus guttatus mg013664m N 0.850
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.850
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.849
Cla019044 Citrullus lanatus Cla019044 N 0.849
Pm008629 Prunus mume Pm008629 I 0.848
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.848
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.848
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.848
mgf019814m Mimulus guttatus mgf019814m N 0.848
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.848
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.848
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.848
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.848
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.848
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.847
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.847
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.847
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.847
TCM_027569 Theobroma cacao TCM_027569 I 0.846
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.846
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.846
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.845
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.845
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.845
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.845
29822.m003477 Ricinus communis 29822.m003477 N 0.845
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.844
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.842
Ca_10533 Cicer arietinum Ca_10533 N 0.842
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.842
PK26651.1 Cannabis sativa PK26651.1 I 0.842
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.841
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.841
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.840
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.840
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.839
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.837
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.836
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.836
Ca_03306 Cicer arietinum Ca_03306 N 0.836
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.835
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.834
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.834
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.834
Bo6g124080 Brassica oleracea Bo6g124080 N 0.833
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.832
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.832
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.832
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.832
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.832
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.832
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.832
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.832
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.832
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.832
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.832
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.831
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.831
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.830
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.830
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.830
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.830
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.828
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.828
mgf008907m Mimulus guttatus mgf008907m I 0.828
Bra035137 Brassica rapa Bra035137 I 0.828
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.827
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.826
Bo5g021520 Brassica oleracea Bo5g021520 N 0.826
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.825
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.825
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.823
ADAP Arabidopsis thaliana AT1G16060 I 0.822
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.822
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.821
30114.m000507 Ricinus communis 30114.m000507 N 0.821
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.821
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.821
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.821
OS08G0442400 Oryza sativa OS08G0442400 I 0.821
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.820
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.819
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.819
TCM_018386 Theobroma cacao TCM_018386 N 0.819
Bra026082 Brassica rapa Bra026082 I 0.818
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.818
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.817
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.817
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.817
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.817
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.817
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.817
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.816
Pm015847 Prunus mume Pm015847 N 0.815
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.815
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.815
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.814
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.814
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.814
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.813
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.813
mgf019116m Mimulus guttatus mgf019116m N 0.813
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.813
OB12G11690 Oryza brachyantha OB12G11690 I 0.813
OB11G11380 Oryza brachyantha OB11G11380 I 0.813
OS12G0126300 Oryza sativa OS12G0126300 I 0.813
F775_06373 Aegilops tauschii F775_06373 N 0.812
Pm006561 Prunus mume Pm006561 N 0.812
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.812
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.811
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.810
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.809
Si007857m.g Setaria italica Si007857m.g N 0.809
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.809
Pm015843 Prunus mume Pm015843 N 0.808
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.806
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.806
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.806
OBART06G03040 Oryza barthii OBART06G03040 N 0.806
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.806
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.806
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.806
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.806
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.806
TCM_011797 Theobroma cacao TCM_011797 N 0.805
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.804
mgf017413m Mimulus guttatus mgf017413m N 0.804
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.803
OBART12G01740 Oryza barthii OBART12G01740 N 0.802
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.802
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.801
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.801
MDP0000281784 Malus domestica MDP0000281784 I 0.801
PK24809.1 Cannabis sativa PK24809.1 I 0.800
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.800
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.800
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.800
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.800
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.800
MDP0000297698 Malus domestica MDP0000297698 N 0.799
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.799
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.799
MDP0000186581 Malus domestica MDP0000186581 N 0.799
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.797
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.797
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.797
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.797
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.796
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.796
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.795
OS06G0145700 Oryza sativa OS06G0145700 N 0.793
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.792
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.791
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.790
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.790
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.787
MDP0000206674 Malus domestica MDP0000206674 N 0.787
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.787
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.787
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.787
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.787
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.787
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.787
Si022186m.g Setaria italica Si022186m.g I 0.787
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.786
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.786
F775_02400 Aegilops tauschii F775_02400 I 0.786
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.786
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.785
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.783
MDP0000166059 Malus domestica MDP0000166059 N 0.776
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.774
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.773
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.769
Si013842m.g Setaria italica Si013842m.g N 0.769
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.768
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.768
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.768
OB05G31600 Oryza brachyantha OB05G31600 I 0.768
OS05G0536250 Oryza sativa OS05G0536250 I 0.768
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.767
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.767
F775_02064 Aegilops tauschii F775_02064 N 0.762
Cla017294 Citrullus lanatus Cla017294 N 0.758
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.756
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.751
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.750
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.750
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.749
OB01G43640 Oryza brachyantha OB01G43640 N 0.749
OB08G23780 Oryza brachyantha OB08G23780 N 0.749
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.748
LPERR01G30020 Leersia perrieri LPERR01G30020 N 0.743
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.738
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.733
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.729
POPTR_0008s01260 Populus trichocarpa POPTR_0008s01260 N 0.725
BGIOSGA004677 Oryza indica BGIOSGA004677 N 0.699
OGLUM01G38820 Oryza glumaepatula OGLUM01G38820 N 0.699
ORUFI01G38130 Oryza rufipogon ORUFI01G38130 N 0.699
OBART01G34800 Oryza barthii OBART01G34800 N 0.699
ORGLA01G0286200 Oryza glaberrima ORGLA01G0286200 N 0.699
ONIVA01G39780 Oryza nivara ONIVA01G39780 N 0.699
Si004222m.g Setaria italica Si004222m.g N 0.695
Pavir.Ea03213 Panicum virgatum Pavir.Ea03213 N 0.694
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N 0.682