cassava19560.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava19560.m1 T006832_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19560.m1 AP2 44 101

Links

Other AP2 family TFs
Other Manihot esculenta TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf017600m Mimulus guttatus mgf017600m N 0.844
PK18855.1 Cannabis sativa PK18855.1 N 0.835
AMTR_s00159p00062070 Amborella trichopoda AMTR_s00159p00062070 N 0.807
POPTR_0016s05670 Populus trichocarpa POPTR_0016s05670 N 0.803
PRUPE_ppa006202mg Prunus persica PRUPE_ppa006202mg N 0.803
Sb09g019190 Sorghum bicolor Sb09g019190 N 0.803
POPTR_0006s04820 Populus trichocarpa POPTR_0006s04820 N 0.803
OPUNC05G13110 Oryza punctata OPUNC05G13110 N 0.803
OLONG_020459 Oryza longistaminata OLONG_020459 N 0.803
OMERI05G13370 Oryza meridionalis OMERI05G13370 N 0.803
ONIVA05G15390 Oryza nivara ONIVA05G15390 N 0.803
ORUFI05G16140 Oryza rufipogon ORUFI05G16140 N 0.803
30006.m000282 Ricinus communis 30006.m000282 N 0.803
Lus10000965.g Linum usitatissimum Lus10000965.g N 0.803
Lus10040140.g Linum usitatissimum Lus10040140.g N 0.803
MDP0000314518 Malus domestica MDP0000314518 N 0.803
gene02470-v1.0-hybrid Fragaria vesca gene02470-v1.0-hybrid N 0.803
Carubv10023272m.g Capsella rubella Carubv10023272m.g N 0.803
OGLUM05G15890 Oryza glumaepatula OGLUM05G15890 N 0.803
cassava421.valid.m1 Manihot esculenta cassava421.valid.m1 N 0.803
Bostr.11568s0008 Boechera stricta Bostr.11568s0008 N 0.803
VIT_08s0007g08580 Vitis vinifera VIT_08s0007g08580 N 0.803
TRIUR3_07433 Triticum urartu TRIUR3_07433 N 0.803
LPERR05G11930 Leersia perrieri LPERR05G11930 N 0.803
F775_10869 Aegilops tauschii F775_10869 N 0.803
GRMZM2G013657 Zea mays GRMZM2G013657 N 0.803
Bo3g035770 Brassica oleracea Bo3g035770 N 0.803
BGIOSGA019793 Oryza indica BGIOSGA019793 N 0.803
OB05G22940 Oryza brachyantha OB05G22940 N 0.803
MTR_7g091390 Medicago truncatula MTR_7g091390 N 0.803
BRADI2G26987 Brachypodium distachyon BRADI2G26987 N 0.803
OBART05G15060 Oryza barthii OBART05G15060 N 0.803
Aquca_009_00241 Aquilegia coerulea Aquca_009_00241 N 0.800
LjSGA_012098.1 Lotus japonicus LjSGA_012098.1 N 0.799
Gorai.003G091500 Gossypium raimondii Gorai.003G091500 N 0.797
orange1.1g018292m.g Citrus sinensis orange1.1g018292m.g N 0.797
Bra004641 Brassica rapa Bra004641 N 0.797
fgenesh2_kg.4__2311__AT2G41710.2 Arabidopsis lyrata fgenesh2_kg.4__2311__AT2G41710.2 N 0.797
Bo4g013420 Brassica oleracea Bo4g013420 N 0.797
Eucgr.A02341 Eucalyptus grandis Eucgr.A02341 N 0.797
Cagra.0914s0005 Capsella grandiflora Cagra.0914s0005 N 0.797
evm.TU.supercontig_224.4 Carica papaya evm.TU.supercontig_224.4 N 0.797
Ca_07237 Cicer arietinum Ca_07237 N 0.797
Pavir.Cb01456 Panicum virgatum Pavir.Cb01456 N 0.797
ORGLA05G0129100 Oryza glaberrima ORGLA05G0129100 N 0.797
MLOC_7325 Hordeum vulgare MLOC_7325 N 0.797
SapurV1A.3066s0020 Salix purpurea SapurV1A.3066s0020 N 0.797
Thhalv10016812m.g Eutrema salsugineum Thhalv10016812m.g N 0.797
PK12273.1 Cannabis sativa PK12273.1 N 0.797
GLYMA03G29240 Glycine max GLYMA03G29240 N 0.797
Si021952m.g Setaria italica Si021952m.g N 0.797
Pavir.Ca01410 Panicum virgatum Pavir.Ca01410 N 0.797
GLYMA19G31960 Glycine max GLYMA19G31960 N 0.797
Ciclev10005012m.g Citrus clementina Ciclev10005012m.g N 0.797
TCM_024554 Theobroma cacao TCM_024554 N 0.797
AT2G41710 Arabidopsis thaliana AT2G41710 N 0.797
SapurV1A.0037s0030 Salix purpurea SapurV1A.0037s0030 N 0.791
mgf019897m Mimulus guttatus mgf019897m N 0.789
GLYMA02G33090 Glycine max GLYMA02G33090 N 0.789
Cucsa.338170 Cucumis sativus Cucsa.338170 N 0.782
chr3.CM0452.130.nd Lotus japonicus chr3.CM0452.130.nd N 0.778
MDP0000803527 Malus domestica MDP0000803527 N 0.775
evm.TU.supercontig_99.39 Carica papaya evm.TU.supercontig_99.39 N 0.733
OMERI06G23370 Oryza meridionalis OMERI06G23370 N 0.733
OB06G31060 Oryza brachyantha OB06G31060 N 0.733
OLONG_002212 Oryza longistaminata OLONG_002212 N 0.733
OBART06G23380 Oryza barthii OBART06G23380 N 0.733
BBM Vitis vinifera VIT_04s0023g00950 N 0.733
BGIOSGA023402 Oryza indica BGIOSGA023402 N 0.733
Traes_6AS_53FA034C9 Triticum aestivum Traes_6AS_53FA034C9 N 0.729
cassava40681.m1 Manihot esculenta cassava40681.m1 N 0.711
Cla022214 Citrullus lanatus Cla022214 N 0.706
PK15670.1 Cannabis sativa PK15670.1 N 0.706
OB03G42600 Oryza brachyantha OB03G42600 N 0.704
Lus10039650.g Linum usitatissimum Lus10039650.g N 0.702
Lus10011730.g Linum usitatissimum Lus10011730.g N 0.702
evm.TU.supercontig_129.70 Carica papaya evm.TU.supercontig_129.70 N 0.700
OGLUM06G03000 Oryza glumaepatula OGLUM06G03000 N 0.697
PDK_20s1313371g002 Phoenix dactylifera PDK_20s1313371g002 N 0.691
Cucsa.353040 Cucumis sativus Cucsa.353040 I 0.682
GRMZM2G146688 Zea mays GRMZM2G146688 N 0.681
30170.m013669 Ricinus communis 30170.m013669 N 0.680