cassava20838.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava20838.m1 T006841_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
abi4
M02648_2.00
Zea mays
CGSYGCYBYB

VRVRGCRSCG
SELEX
Mathelier et al.(2014)
MA0123.1
0.783 0.900
abi4
M09706_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABI4_01
0.783 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava20838.m1 AP2 58 109

Links

Other AP2 family TFs
Other Manihot esculenta TFs

Invalid Input OrderBy

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action