cassava25057.valid.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava25057.valid.m1 T006864_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF018
M00842_2.00
Arabidopsis thaliana
HRCCGDCMN

NKGHCGGYD
PBM
Franco-Zorrilla et al.(2014)
ORA47
0.796 0.900
ERF018
M01610_2.00
Arabidopsis thaliana
NRCCGNCHN

NDGNCGGYN
PBM
Weirauch et al.(2014)
pTH7215
0.796 0.900
ERF017
M06568_2.00
Arabidopsis thaliana
NHNYCRCCGWCMWH

DWKGWCGGYGRNDN
Dap-seq
OMalley et al.(2016)
At1g19210_col_a
0.795 0.920
ERF017
M06569_2.00
Arabidopsis thaliana
NNNHNNCRCCGWCMW

WKGWCGGYGNNDNNN
Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a
0.795 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava25057.valid.m1 AP2 15 66

Links

Other AP2 family TFs
Other Manihot esculenta TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.821
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.819
29739.m003716 Ricinus communis 29739.m003716 I 0.819
Pm027117 Prunus mume Pm027117 I 0.819
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.814
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.812
TCM_037415 Theobroma cacao TCM_037415 I 0.811
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.811
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.809
Bra016518 Brassica rapa Bra016518 I 0.805
Bo8g068370 Brassica oleracea Bo8g068370 I 0.805
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.805
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.805
Bo8g102870 Brassica oleracea Bo8g102870 I 0.803
Bra031069 Brassica rapa Bra031069 I 0.803
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.803
MDP0000649022 Malus domestica MDP0000649022 I 0.802
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.802
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.801
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.801
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.799
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.799
mgf024162m Mimulus guttatus mgf024162m I 0.798
ERF018 Arabidopsis thaliana AT1G74930 D 0.796
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.796
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.796
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.796
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.795
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.795
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.795
ERF017 Arabidopsis thaliana AT1G19210 D 0.795
Bra015882 Brassica rapa Bra015882 I 0.795
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.795
MDP0000704216 Malus domestica MDP0000704216 I 0.795
mgf021940m Mimulus guttatus mgf021940m I 0.793
Bo6g119120 Brassica oleracea Bo6g119120 I 0.793
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.792
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.792
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.792
TCM_037486 Theobroma cacao TCM_037486 I 0.791
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.791
Cla011318 Citrullus lanatus Cla011318 I 0.790
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.790
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.790
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.790
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.789
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.788
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.788
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.788
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.788
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.788
Bra003780 Brassica rapa Bra003780 I 0.788
Bo6g086740 Brassica oleracea Bo6g086740 I 0.788
Ca_01683 Cicer arietinum Ca_01683 I 0.788
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.787
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.787
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.786
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.786
29739.m003647 Ricinus communis 29739.m003647 I 0.786
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.786
Ca_09124 Cicer arietinum Ca_09124 I 0.786
mgf025452m Mimulus guttatus mgf025452m I 0.784
Cla007584 Citrullus lanatus Cla007584 I 0.784
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.781
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.778
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.778
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.777
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.777
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.776
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.776
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.776
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.775
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.775
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.774
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.774
Si019636m.g Setaria italica Si019636m.g I 0.774
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.773
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.773
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.772
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.771
Bra025719 Brassica rapa Bra025719 I 0.768
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.766
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.765
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.765
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.763
Ca_19295 Cicer arietinum Ca_19295 I 0.763
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.761
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.761
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.761
Ca_19297 Cicer arietinum Ca_19297 I 0.759
Bra006599 Brassica rapa Bra006599 I 0.757
Bo3g015600 Brassica oleracea Bo3g015600 I 0.757
Ca_19296 Cicer arietinum Ca_19296 I 0.757
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.756
Bo9g149820 Brassica oleracea Bo9g149820 I 0.756
Bra002377 Brassica rapa Bra002377 I 0.756
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.756
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.756
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.755
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.755
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.754
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.754
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.752
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.751
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.750
ERF016 Arabidopsis thaliana AT5G21960 I 0.750
Cla022291 Citrullus lanatus Cla022291 I 0.749
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.749
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.749
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.749
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.747
Bo2g023630 Brassica oleracea Bo2g023630 I 0.746
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.745
Bra020162 Brassica rapa Bra020162 I 0.745
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.736
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.735
OS02G0781300 Oryza sativa OS02G0781300 I 0.734
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.734
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.734
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.734
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.734
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.734
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.734
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.734
PK18548.1 Cannabis sativa PK18548.1 I 0.733
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.729
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.726
Si008104m.g Setaria italica Si008104m.g I 0.725
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.722
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.719
OB08G24280 Oryza brachyantha OB08G24280 I 0.699
OBART08G16950 Oryza barthii OBART08G16950 I 0.699
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.699
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.699
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.699
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.699
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.699
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.699
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.699
Si015027m.g Setaria italica Si015027m.g I 0.699
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.699
OS08G0454000 Oryza sativa OS08G0454000 I 0.699
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.699
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.699
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.693
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.691
F775_23111 Aegilops tauschii F775_23111 I 0.690
Sb07g022265 Sorghum bicolor Sb07g022265 I 0.686
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.684