cassava38073.valid.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava38073.valid.m1 T006906_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava38073.valid.m1 AP2 107 155

Links

Other AP2 family TFs
Other Manihot esculenta TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf003491m Mimulus guttatus mgf003491m N 0.777
mgf007349m Mimulus guttatus mgf007349m N 0.777
Lus10022769.g Linum usitatissimum Lus10022769.g N 0.776
Lus10011836.g Linum usitatissimum Lus10011836.g N 0.776
GLYMA18G33460 Glycine max GLYMA18G33460 N 0.770
Gorai.007G156300 Gossypium raimondii Gorai.007G156300 N 0.767
Gorai.001G231300 Gossypium raimondii Gorai.001G231300 N 0.767
POPTR_0002s24750 Populus trichocarpa POPTR_0002s24750 N 0.767
TCM_002835 Theobroma cacao TCM_002835 N 0.767
PRUPE_ppa011812mg Prunus persica PRUPE_ppa011812mg N 0.767
AMTR_s00013p00252260 Amborella trichopoda AMTR_s00013p00252260 N 0.767
Pm020315 Prunus mume Pm020315 N 0.767
Ciclev10021891m.g Citrus clementina Ciclev10021891m.g N 0.767
evm.TU.supercontig_21.106 Carica papaya evm.TU.supercontig_21.106 N 0.767
orange1.1g025914m.g Citrus sinensis orange1.1g025914m.g N 0.767
Gorai.001G105100 Gossypium raimondii Gorai.001G105100 N 0.767
GLYMA08G46250 Glycine max GLYMA08G46250 N 0.765
Cla002744 Citrullus lanatus Cla002744 N 0.763
OS02G0499000 Oryza sativa OS02G0499000 N 0.762
OPUNC02G15530 Oryza punctata OPUNC02G15530 N 0.762
ORUFI02G18290 Oryza rufipogon ORUFI02G18290 N 0.762
ORGLA02G0152600 Oryza glaberrima ORGLA02G0152600 N 0.762
OB02G25330 Oryza brachyantha OB02G25330 N 0.762
ONIVA02G18870 Oryza nivara ONIVA02G18870 N 0.762
LPERR02G13930 Leersia perrieri LPERR02G13930 N 0.762
OBART02G17450 Oryza barthii OBART02G17450 N 0.762
OGLUM02G17700 Oryza glumaepatula OGLUM02G17700 N 0.762
BGIOSGA008254 Oryza indica BGIOSGA008254 N 0.762
Gorai.001G188300 Gossypium raimondii Gorai.001G188300 N 0.760
MDP0000300382 Malus domestica MDP0000300382 N 0.760
cassava6828.valid.m1 Manihot esculenta cassava6828.valid.m1 N 0.760
chr1.LjT46N10.100.nd Lotus japonicus chr1.LjT46N10.100.nd N 0.760
MDP0000675982 Malus domestica MDP0000675982 N 0.760
MDP0000129941 Malus domestica MDP0000129941 N 0.760
MTR_8g012655 Medicago truncatula MTR_8g012655 N 0.757
GSMUA_Achr9G01590_001 Musa acuminata GSMUA_Achr9G01590_001 N 0.757
Ca_17230 Cicer arietinum Ca_17230 N 0.757
Sb04g020150 Sorghum bicolor Sb04g020150 N 0.756
Traes_6DS_43372C0A6 Triticum aestivum Traes_6DS_43372C0A6 N 0.756
PGSC0003DMG400017485 Solanum tuberosum PGSC0003DMG400017485 N 0.756
Pavir.J28064 Panicum virgatum Pavir.J28064 N 0.756
Pavir.Aa01947 Panicum virgatum Pavir.Aa01947 N 0.756
Solyc09g059510.2 Solanum lycopersicum Solyc09g059510.2 N 0.756
Traes_6AL_13895C140 Triticum aestivum Traes_6AL_13895C140 N 0.756
BRADI3G43822 Brachypodium distachyon BRADI3G43822 N 0.756
Si018306m.g Setaria italica Si018306m.g N 0.756
VIT_00s0184g00010 Vitis vinifera VIT_00s0184g00010 N 0.754
Cucsa.150110 Cucumis sativus Cucsa.150110 N 0.754
OLONG_009588 Oryza longistaminata OLONG_009588 N 0.749
MTR_7g055857 Medicago truncatula MTR_7g055857 N 0.747
Cucsa.078000 Cucumis sativus Cucsa.078000 N 0.745
PK01824.1 Cannabis sativa PK01824.1 N 0.745
Cla015151 Citrullus lanatus Cla015151 N 0.745
chr3.CM0423.200.nd Lotus japonicus chr3.CM0423.200.nd N 0.741
Ca_11707 Cicer arietinum Ca_11707 N 0.741
GSMUA_Achr8G00300_001 Musa acuminata GSMUA_Achr8G00300_001 N 0.740
e_gw1.317.27.1 Physcomitrella patens e_gw1.317.27.1 N 0.734
SELMODRAFT_420254 Selaginella moellendorffii SELMODRAFT_420254 N 0.724
SELMODRAFT_443366 Selaginella moellendorffii SELMODRAFT_443366 N 0.724
AT4G13040 Arabidopsis thaliana AT4G13040 N 0.723
Bostr.2021s0045 Boechera stricta Bostr.2021s0045 N 0.717
Bo8g033910 Brassica oleracea Bo8g033910 N 0.717
Cagra.2997s0002 Capsella grandiflora Cagra.2997s0002 N 0.717
Carubv10005663m.g Capsella rubella Carubv10005663m.g N 0.717
Thhalv10026242m.g Eutrema salsugineum Thhalv10026242m.g N 0.717
Bra034895 Brassica rapa Bra034895 N 0.717
GSMUA_Achr6G06510_001 Musa acuminata GSMUA_Achr6G06510_001 N 0.711
Bo11579s010 Brassica oleracea Bo11579s010 N 0.710
estExt_fgenesh1_pg.C_930051 Physcomitrella patens estExt_fgenesh1_pg.C_930051 N 0.705
PDK_20s1512801g001 Phoenix dactylifera PDK_20s1512801g001 N 0.705
mgf003727m Mimulus guttatus mgf003727m N 0.700
Eucgr.K02136 Eucalyptus grandis Eucgr.K02136 N 0.695
30217.m000254 Ricinus communis 30217.m000254 N 0.692
F775_30629 Aegilops tauschii F775_30629 N 0.683
TRIUR3_27883 Triticum urartu TRIUR3_27883 N 0.683