cassava9593.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava9593.m1 T006981_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava9593.m1 AP2 20 71

Links

Other AP2 family TFs
Other Manihot esculenta TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29938.m000611 Ricinus communis 29938.m000611 I 0.721
cassava8476.m1 Manihot esculenta cassava8476.m1 I 0.719
GLYMA11G01700 Glycine max GLYMA11G01700 I 0.716
Ca_15055 Cicer arietinum Ca_15055 I 0.714
MTR_5g008790 Medicago truncatula MTR_5g008790 I 0.714
SapurV1A.3847s0010 Salix purpurea SapurV1A.3847s0010 I 0.700
SapurV1A.4200s0010 Salix purpurea SapurV1A.4200s0010 I 0.700
chr2.CM0018.340.nd Lotus japonicus chr2.CM0018.340.nd I 0.699
Lus10006179.g Linum usitatissimum Lus10006179.g I 0.692
POPTR_0013s10420 Populus trichocarpa POPTR_0013s10420 I 0.688
Lus10041044.g Linum usitatissimum Lus10041044.g I 0.686
Cla012182 Citrullus lanatus Cla012182 I 0.682
Lus10009468.g Linum usitatissimum Lus10009468.g I 0.680
Ciclev10023345m.g Citrus clementina Ciclev10023345m.g I 0.677
orange1.1g045327m.g Citrus sinensis orange1.1g045327m.g I 0.677