Cucsa.055920 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.055920 T006992_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.732 0.820
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.732 0.820
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.728 0.840
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.728 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.055920.1 AP2 14 65

Links

Other AP2 family TFs
Other Cucumis sativus TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla022291 Citrullus lanatus Cla022291 I 0.825
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.774
ERF016 Arabidopsis thaliana AT5G21960 I 0.774
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.767
Bo9g149820 Brassica oleracea Bo9g149820 I 0.766
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.766
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.766
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.766
Bra002377 Brassica rapa Bra002377 I 0.766
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.766
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.766
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.761
Cla011318 Citrullus lanatus Cla011318 I 0.761
Bo3g015600 Brassica oleracea Bo3g015600 I 0.757
Bra006599 Brassica rapa Bra006599 I 0.757
Bra020162 Brassica rapa Bra020162 I 0.755
mgf021940m Mimulus guttatus mgf021940m I 0.753
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.749
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.749
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.749
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.748
29739.m003716 Ricinus communis 29739.m003716 I 0.748
Pm027117 Prunus mume Pm027117 I 0.748
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.748
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.748
Bo2g023630 Brassica oleracea Bo2g023630 I 0.746
Cla007584 Citrullus lanatus Cla007584 I 0.745
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.743
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.743
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.741
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.741
Bra003780 Brassica rapa Bra003780 I 0.741
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.740
Bra016518 Brassica rapa Bra016518 I 0.740
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.740
29739.m003647 Ricinus communis 29739.m003647 I 0.740
Bo8g068370 Brassica oleracea Bo8g068370 I 0.740
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.739
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.739
TCM_037415 Theobroma cacao TCM_037415 I 0.739
Bo8g102870 Brassica oleracea Bo8g102870 I 0.739
Bra031069 Brassica rapa Bra031069 I 0.739
Bo6g086740 Brassica oleracea Bo6g086740 I 0.739
Bra015882 Brassica rapa Bra015882 I 0.738
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.738
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.737
MDP0000649022 Malus domestica MDP0000649022 I 0.737
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.736
mgf024162m Mimulus guttatus mgf024162m I 0.735
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.734
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.733
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.733
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.732
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.732
mgf025452m Mimulus guttatus mgf025452m I 0.732
ERF018 Arabidopsis thaliana AT1G74930 D 0.732
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.731
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.731
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.731
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.729
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.729
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.729
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.728
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.728
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.728
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.728
TCM_037486 Theobroma cacao TCM_037486 I 0.728
ERF017 Arabidopsis thaliana AT1G19210 D 0.728
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.728
Bo6g119120 Brassica oleracea Bo6g119120 I 0.728
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.727
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.727
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.726
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.726
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.726
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.726
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.726
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.726
OS02G0781300 Oryza sativa OS02G0781300 I 0.726
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.726
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.726
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.726
MDP0000704216 Malus domestica MDP0000704216 I 0.725
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.725
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.724
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.722
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.721
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.721
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.720
Si019636m.g Setaria italica Si019636m.g I 0.720
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.720
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.719
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.719
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.719
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.718
Ca_01683 Cicer arietinum Ca_01683 I 0.718
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.718
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.717
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.717
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.717
Ca_09124 Cicer arietinum Ca_09124 I 0.716
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.716
Ca_19295 Cicer arietinum Ca_19295 I 0.716
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.714
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.714
Ca_19297 Cicer arietinum Ca_19297 I 0.713
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.713
Ca_19296 Cicer arietinum Ca_19296 I 0.711
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.711
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.711
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.709
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.708
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.707
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.707
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.706
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.706
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.706
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.704
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.704
Bra025719 Brassica rapa Bra025719 I 0.703
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.702
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.701
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.699
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.696
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.693
Si008104m.g Setaria italica Si008104m.g I 0.693
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.687
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.683
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.682
ONIVA06G07220 Oryza nivara ONIVA06G07220 N 0.677