Cucsa.130200 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.130200 T007031_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.695 0.755
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.682 0.717
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.130200.1 AP2 72 133

Links

Other AP2 family TFs
Other Cucumis sativus TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla012194 Citrullus lanatus Cla012194 I 0.816
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.707
29729.m002292 Ricinus communis 29729.m002292 I 0.704
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.703
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.701
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.701
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.699
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.699
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.695
Bra006460 Brassica rapa Bra006460 I 0.695
Bo3g013160 Brassica oleracea Bo3g013160 I 0.695
PK07402.1 Cannabis sativa PK07402.1 D 0.695
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.695
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.688
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.688
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.688
Bo9g177130 Brassica oleracea Bo9g177130 I 0.687
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.686
Pm018989 Prunus mume Pm018989 I 0.685
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.685
POPTR_0006s10510 Populus trichocarpa POPTR_0006s10510 I 0.684
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.684
PK08602.1 Cannabis sativa PK08602.1 D 0.682
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.682
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.681
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.680
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.679
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.679
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.678
Ca_12446 Cicer arietinum Ca_12446 I 0.678
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.677
Cla006713 Citrullus lanatus Cla006713 I 0.677
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.677