Cucsa.161310 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.161310 T007043_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TINY
M01094_2.00
Arabidopsis thaliana
NHRCCGACAN

NTGTCGGYDN
PBM
Lambert et al.(2019)
pTH11541
0.783 0.940
TINY
M06669_2.00
Arabidopsis thaliana
HNYCRCCGACANHDN

NHDNTGTCGGYGRND
Dap-seq
OMalley et al.(2016)
TINY_col_a
0.783 0.940
ERF043
M01627_2.00
Arabidopsis thaliana
YRCCGACA

TGTCGGYR
PBM
Weirauch et al.(2014)
pTH7413
0.751 0.880
ERF043
M06651_2.00
Arabidopsis thaliana
NNYCACCGACANHNNN

NNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a
0.751 0.880
ERF043
M06652_2.00
Arabidopsis thaliana
NNYCACCGACANHNNH

DNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_col
0.751 0.880
ERF035
M06631_2.00
Arabidopsis thaliana
YCACCGACANWDNH

DNHWNTGTCGGTGR
Dap-seq
OMalley et al.(2016)
AT3G60490_col_a
0.737 0.880
ERF035
M06632_2.00
Arabidopsis thaliana
NNBCACCGACAHWNNN

NNNWDTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a
0.737 0.880
ERF034
M06614_2.00
Arabidopsis thaliana
NHNYCACCGACANHD

HDNTGTCGGTGRNDN
Dap-seq
OMalley et al.(2016)
At2g44940_col_a
0.736 0.860
ERF034
M06615_2.00
Arabidopsis thaliana
NDBCACCGACANH

DNTGTCGGTGVHN
Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a
0.736 0.860
Q8LKX0_MAIZE
M09722_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DBF2_01
0.702 0.860
Q5MAR7_BRANA
M09742_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII1_01
0.700 0.840
Q3HS44_BRANA
M09741_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII2_01
0.700 0.840
Q3HS43_BRANA
M09740_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBIII3_01
0.700 0.840
AT3G16280
M06618_2.00
Arabidopsis thaliana
NDNCACCGACANHN

NDNTGTCGGTGNHN
Dap-seq
OMalley et al.(2016)
AT3G16280_col_a
0.692 0.820
AT3G16280
M06619_2.00
Arabidopsis thaliana
BCACCGACAHWNNN

NNNWDTGTCGGTGV
Dap-seq
OMalley et al.(2016)
AT3G16280_colamp_a
0.692 0.820
ERF039
M01620_2.00
Arabidopsis thaliana
NNRCCGACDN

NHGTCGGYNN
PBM
Weirauch et al.(2014)
pTH8101
0.690 0.840
ERF039
M06635_2.00
Arabidopsis thaliana
HNNHDYCRCCGMCRN

NYGKCGGYGRHDNND
Dap-seq
OMalley et al.(2016)
At4g16750_col_a
0.690 0.840
ERF039
M06636_2.00
Arabidopsis thaliana
NNNNNNYCACCGACAHH

DDTGTCGGTGRNNNNNN
Dap-seq
OMalley et al.(2016)
At4g16750_colamp_a
0.690 0.840
ERF038
M06608_2.00
Arabidopsis thaliana
NHNHHDYCRCCGACA

TGTCGGYGRHDDNDN
Dap-seq
OMalley et al.(2016)
ERF38_col_a
0.690 0.820
ERF037
M00843_2.00
Arabidopsis thaliana
NRCCGACRN

NYGTCGGYN
PBM
Franco-Zorrilla et al.(2014)
At1g77200
0.682 0.840
ERF037
M06599_2.00
Arabidopsis thaliana
YCRCCGACAHHNNH

DNNDDTGTCGGYGR
Dap-seq
OMalley et al.(2016)
AT1G77200_col_a
0.682 0.840
ERF037
M06600_2.00
Arabidopsis thaliana
NNYACCGACAHN

NDTGTCGGTRNN
Dap-seq
OMalley et al.(2016)
AT1G77200_colamp_a
0.682 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.161310.1 AP2 43 94

Links

Other AP2 family TFs
Other Cucumis sativus TFs

405 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_16000 Aegilops tauschii F775_16000 I 0.000
F775_14365 Aegilops tauschii F775_14365 I 0.000
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.000
AMTR_s00003p00252470 Amborella trichopoda AMTR_s00003p00252470 I 0.000
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I 0.000
Aquca_059_00027 Aquilegia coerulea Aquca_059_00027 I 0.000
Aquca_024_00081 Aquilegia coerulea Aquca_024_00081 I 0.000
anac025 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000277 I 0.000
ATNAC2 Arabidopsis lyrata fgenesh2_kg.3__1698__AT3G15510.1 I 0.000
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.000
NAC018 Arabidopsis thaliana AT1G52880 D 0.000
NAC025 Arabidopsis thaliana AT1G61110 D 0.000
NAC056 Arabidopsis thaliana AT3G15510 I 0.000
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.000
Bostr.28625s0148 Boechera stricta Bostr.28625s0148 I 0.000
Bostr.10040s0089 Boechera stricta Bostr.10040s0089 I 0.000
Bo01282s010 Brassica oleracea Bo01282s010 I 0.000
Bo1g128420 Brassica oleracea Bo1g128420 I 0.000
Bo5g127030 Brassica oleracea Bo5g127030 I 0.000
Bra027237 Brassica rapa Bra027237 I 0.000
Bra021114 Brassica rapa Bra021114 I 0.000
Bra001597 Brassica rapa Bra001597 I 0.000
Bra027101 Brassica rapa Bra027101 I 0.000
PK08629.1 Cannabis sativa PK08629.1 I 0.000
PK19059.1 Cannabis sativa PK19059.1 I 0.000
PK25206.1 Cannabis sativa PK25206.1 I 0.000
Cagra.2213s0001 Capsella grandiflora Cagra.2213s0001 I 0.000
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.000
Carubv10021371m.g Capsella rubella Carubv10021371m.g I 0.000
Carubv10014008m.g Capsella rubella Carubv10014008m.g I 0.000
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.000
evm.TU.contig_33298 Carica papaya evm.TU.contig_33298 I 0.000
evm.TU.supercontig_27.81 Carica papaya evm.TU.supercontig_27.81 I 0.000
evm.TU.supercontig_435.1 Carica papaya evm.TU.supercontig_435.1 N 0.000
evm.TU.supercontig_80.94 Carica papaya evm.TU.supercontig_80.94 I 0.000
Ca_06901 Cicer arietinum Ca_06901 I 0.000
Ca_12031 Cicer arietinum Ca_12031 I 0.000
Ca_19654 Cicer arietinum Ca_19654 I 0.000
Ca_16379 Cicer arietinum Ca_16379 I 0.000
Ca_12660 Cicer arietinum Ca_12660 I 0.000
Cla023771 Citrullus lanatus Cla023771 I 0.000
Cla011948 Citrullus lanatus Cla011948 I 0.000
Ciclev10015688m.g Citrus clementina Ciclev10015688m.g I 0.000
Ciclev10008628m.g Citrus clementina Ciclev10008628m.g I 0.000
Ciclev10030252m.g Citrus clementina Ciclev10030252m.g N 0.000
orange1.1g016791m.g Citrus sinensis orange1.1g016791m.g I 0.000
orange1.1g045934m.g Citrus sinensis orange1.1g045934m.g N 0.000
orange1.1g042614m.g Citrus sinensis orange1.1g042614m.g N 0.000
orange1.1g017854m.g Citrus sinensis orange1.1g017854m.g I 0.000
Cucsa.341790 Cucumis sativus Cucsa.341790 I 0.000
Cucsa.074600 Cucumis sativus Cucsa.074600 I 0.000
Eucgr.B02485 Eucalyptus grandis Eucgr.B02485 I 0.000
Eucgr.F01091 Eucalyptus grandis Eucgr.F01091 I 0.000
Thhalv10022353m.g Eutrema salsugineum Thhalv10022353m.g I 0.000
Thhalv10023591m.g Eutrema salsugineum Thhalv10023591m.g I 0.000
gene31150-v1.0-hybrid Fragaria vesca gene31150-v1.0-hybrid I 0.000
gene30439-v1.0-hybrid Fragaria vesca gene30439-v1.0-hybrid I 0.000
gene04766-v1.0-hybrid Fragaria vesca gene04766-v1.0-hybrid I 0.000
GLYMA06G11970 Glycine max GLYMA06G11970 I 0.000
GLYMA13G31660 Glycine max GLYMA13G31660 I 0.000
GLYMA13G35560 Glycine max GLYMA13G35560 I 0.000
GLYMA19G36421 Glycine max GLYMA19G36421 I 0.000
GLYMA12G34990 Glycine max GLYMA12G34990 I 0.000
GLYMA12G29360 Glycine max GLYMA12G29360 I 0.000
GLYMA12G21272 Glycine max GLYMA12G21272 I 0.000
GLYMA10G09246 Glycine max GLYMA10G09246 N 0.000
GLYMA05G15533 Glycine max GLYMA05G15533 I 0.000
GLYMA03G33690 Glycine max GLYMA03G33690 I 0.000
GLYMA13G40251 Glycine max GLYMA13G40251 I 0.000
Gorai.009G170700 Gossypium raimondii Gorai.009G170700 I 0.000
Gorai.013G167100 Gossypium raimondii Gorai.013G167100 I 0.000
Gorai.009G433100 Gossypium raimondii Gorai.009G433100 I 0.000
Gorai.002G073800 Gossypium raimondii Gorai.002G073800 I 0.000
MLOC_8116 Hordeum vulgare MLOC_8116 I 0.000
LPERR07G16320 Leersia perrieri LPERR07G16320 I 0.000
Lus10007410.g Linum usitatissimum Lus10007410.g I 0.000
Lus10015076.g Linum usitatissimum Lus10015076.g N 0.000
Lus10023179.g Linum usitatissimum Lus10023179.g N 0.000
Lus10032657.g Linum usitatissimum Lus10032657.g I 0.000
Lus10036117.g Linum usitatissimum Lus10036117.g I 0.000
Lus10043095.g Linum usitatissimum Lus10043095.g I 0.000
LjSGA_023894.2 Lotus japonicus LjSGA_023894.2 I 0.000
chr3.CM0111.130.nd Lotus japonicus chr3.CM0111.130.nd I 0.000
chr1.CM0033.600.nc Lotus japonicus chr1.CM0033.600.nc I 0.000
LjSGA_036741.1 Lotus japonicus LjSGA_036741.1 I 0.000
LjT04N09.140.nd Lotus japonicus LjT04N09.140.nd I 0.000
MDP0000173636 Malus domestica MDP0000173636 I 0.000
MDP0000802924 Malus domestica MDP0000802924 N 0.000
MDP0000868419 Malus domestica MDP0000868419 I 0.000
MDP0000120881 Malus domestica MDP0000120881 I 0.000
MDP0000255884 Malus domestica MDP0000255884 N 0.000
MDP0000180683 Malus domestica MDP0000180683 I 0.000
cassava3577.m1 Manihot esculenta cassava3577.m1 I 0.000
cassava26728.m1 Manihot esculenta cassava26728.m1 I 0.000
cassava5169.m1 Manihot esculenta cassava5169.m1 I 0.000
cassava42314.valid.m1 Manihot esculenta cassava42314.valid.m1 I 0.000
MTR_4g089135 Medicago truncatula MTR_4g089135 I 0.000
MTR_3g088110 Medicago truncatula MTR_3g088110 I 0.000
MTR_2g093810 Medicago truncatula MTR_2g093810 I 0.000
MTR_2g080010 Medicago truncatula MTR_2g080010 I 0.000
MTR_7g100990 Medicago truncatula MTR_7g100990 I 0.000
mgf016382m Mimulus guttatus mgf016382m I 0.000
mgf025001m Mimulus guttatus mgf025001m I 0.000
mgf007362m Mimulus guttatus mgf007362m I 0.000
GSMUA_Achr9G19520_001 Musa acuminata GSMUA_Achr9G19520_001 I 0.000
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.000
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.000
GSMUA_Achr4G02380_001 Musa acuminata GSMUA_Achr4G02380_001 I 0.000
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.000
GSMUA_Achr10G04570_001 Musa acuminata GSMUA_Achr10G04570_001 I 0.000
OBART07G19010 Oryza barthii OBART07G19010 I 0.000
OB07G24770 Oryza brachyantha OB07G24770 I 0.000
ORGLA07G0243600 Oryza glaberrima ORGLA07G0243600 I 0.000
OGLUM07G18780 Oryza glumaepatula OGLUM07G18780 I 0.000
ONAC010 Oryza indica BGIOSGA024071 I 0.000
OLONG_002265 Oryza longistaminata OLONG_002265 I 0.000
OMERI07G15720 Oryza meridionalis OMERI07G15720 I 0.000
ONIVA07G17340 Oryza nivara ONIVA07G17340 I 0.000
OPUNC07G17890 Oryza punctata OPUNC07G17890 I 0.000
ORUFI07G19770 Oryza rufipogon ORUFI07G19770 I 0.000
ONAC010 Oryza sativa OS07G0566500 I 0.000
Pavir.Ba00642 Panicum virgatum Pavir.Ba00642 I 0.000
Pavir.J08552 Panicum virgatum Pavir.J08552 I 0.000
POPTR_0011s12420 Populus trichocarpa POPTR_0011s12420 I 0.000
POPTR_0004s03820 Populus trichocarpa POPTR_0004s03820 I 0.000
POPTR_0011s04650 Populus trichocarpa POPTR_0011s04650 I 0.000
POPTR_0001s41490 Populus trichocarpa POPTR_0001s41490 I 0.000
Pm011604 Prunus mume Pm011604 I 0.000
Pm030099 Prunus mume Pm030099 N 0.000
Pm009955 Prunus mume Pm009955 I 0.000
Pm025312 Prunus mume Pm025312 I 0.000
PRUPE_ppa007445mg Prunus persica PRUPE_ppa007445mg I 0.000
PRUPE_ppa017586mg Prunus persica PRUPE_ppa017586mg N 0.000
PRUPE_ppa007314mg Prunus persica PRUPE_ppa007314mg I 0.000
PRUPE_ppa015363mg Prunus persica PRUPE_ppa015363mg N 0.000
PRUPE_ppa007577mg Prunus persica PRUPE_ppa007577mg I 0.000
27961.m000091 Ricinus communis 27961.m000091 I 0.000
29851.m002359 Ricinus communis 29851.m002359 I 0.000
30111.m000742 Ricinus communis 30111.m000742 N 0.000
30078.m002348 Ricinus communis 30078.m002348 I 0.000
SapurV1A.0127s0010 Salix purpurea SapurV1A.0127s0010 I 0.000
SapurV1A.0044s0420 Salix purpurea SapurV1A.0044s0420 I 0.000
SapurV1A.2174s0010 Salix purpurea SapurV1A.2174s0010 I 0.000
SapurV1A.0746s0010 Salix purpurea SapurV1A.0746s0010 I 0.000
SapurV1A.0299s0130 Salix purpurea SapurV1A.0299s0130 I 0.000
SELMODRAFT_147012 Selaginella moellendorffii SELMODRAFT_147012 I 0.000
SELMODRAFT_108667 Selaginella moellendorffii SELMODRAFT_108667 I 0.000
Si032676m.g Setaria italica Si032676m.g I 0.000
Solyc07g063420.2 Solanum lycopersicum Solyc07g063420.2 I 0.000
Solyc10g006880.2 Solanum lycopersicum Solyc10g006880.2 I 0.000
PGSC0003DMG400019293 Solanum tuberosum PGSC0003DMG400019293 I 0.000
Sb02g036620 Sorghum bicolor Sb02g036620 I 0.000
TCM_029931 Theobroma cacao TCM_029931 I 0.000
TCM_031363 Theobroma cacao TCM_031363 I 0.000
TCM_041055 Theobroma cacao TCM_041055 I 0.000
Traes_6DS_90A627C3F Triticum aestivum Traes_6DS_90A627C3F I 0.000
Traes_6AS_6F89CC969 Triticum aestivum Traes_6AS_6F89CC969 I 0.000
Traes_2DS_5DF921ABB Triticum aestivum Traes_2DS_5DF921ABB I 0.000
Traes_2AS_09457EDD8 Triticum aestivum Traes_2AS_09457EDD8 I 0.000
VIT_06s0004g03080 Vitis vinifera VIT_06s0004g03080 I 0.000
VIT_08s0040g02110 Vitis vinifera VIT_08s0040g02110 I 0.000
VIT_19s0014g03300 Vitis vinifera VIT_19s0014g03300 I 0.000
GRMZM2G179885 Zea mays GRMZM2G179885 I 0.000