CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.198700
(
Cucumis sativus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Cucsa.198700
T007054_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.198700.1
AP2
19
70
RRFLGVRQRPSGRWVAEIKVSSQKLRLWLGTFNRAEDAAMAYDRAARLLRGR
Links
Other
AP2
family TFs
Other
Cucumis sativus
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla019296
Citrullus lanatus
Cla019296
N
0.820
PK28640.1
Cannabis sativa
PK28640.1
I
0.726
MTR_4g112490
Medicago truncatula
MTR_4g112490
N
0.707
MTR_4g111915
Medicago truncatula
MTR_4g111915
N
0.707
Pm030235
Prunus mume
Pm030235
I
0.706
TCM_014471
Theobroma cacao
TCM_014471
I
0.700
Ca_06590
Cicer arietinum
Ca_06590
N
0.699
PRUPE_ppa018710mg
Prunus persica
PRUPE_ppa018710mg
I
0.695
orange1.1g042608m.g
Citrus sinensis
orange1.1g042608m.g
N
0.693
Ciclev10022187m.g
Citrus clementina
Ciclev10022187m.g
N
0.693
MDP0000157628
Malus domestica
MDP0000157628
I
0.691
MDP0000197375
Malus domestica
MDP0000197375
I
0.691
Solyc03g114440.1
Solanum lycopersicum
Solyc03g114440.1
N
0.690
Lus10013764.g
Linum usitatissimum
Lus10013764.g
I
0.687
AMTR_s00006p00266920
Amborella trichopoda
AMTR_s00006p00266920
I
0.687
Lus10039171.g
Linum usitatissimum
Lus10039171.g
I
0.684
cassava9303.m1
Manihot esculenta
cassava9303.m1
I
0.682
PGSC0003DMG400024606
Solanum tuberosum
PGSC0003DMG400024606
I
0.680