Cucsa.260270 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.260270 T007077_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AIL7
M06688_2.00
Arabidopsis thaliana
CRNWTHYCRAG

CTYGRDAWNYG
Dap-seq
OMalley et al.(2016)
AIL7_col_a
0.811 0.817
AIL7
M06689_2.00
Arabidopsis thaliana
DCRNWTHYCRAG

CTYGRDAWNYGH
Dap-seq
OMalley et al.(2016)
AIL7_colamp_a
0.811 0.817
PLT1
M06622_2.00
Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN

NNDYCTYGRDWWNCGTGHH
Dap-seq
OMalley et al.(2016)
PLT1_col_a
0.810 0.798
PLT1
M06623_2.00
Arabidopsis thaliana
DYDCRNWTYYCRAG

CTYGRRAWNYGHRH
Dap-seq
OMalley et al.(2016)
PLT1_colamp_a
0.810 0.798
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW

WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.798 0.798
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG

CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.798 0.798
Q6SA75_TOBAC
M09733_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_01
0.797 0.788
Q6SA75_TOBAC
M09734_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_02
0.797 0.788
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.260270.1 AP2 250 311
Cucsa.260270.1 AP2 353 405

Links

Other AP2 family TFs
Other Cucumis sativus TFs

526 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00052p00202630 Amborella trichopoda AMTR_s00052p00202630 I 0.000
Aquca_027_00077 Aquilegia coerulea Aquca_027_00077 I 0.000
fgenesh2_kg.3__997__AT3G09735.1 Arabidopsis lyrata fgenesh2_kg.3__997__AT3G09735.1 I 0.000
fgenesh1_pm.C_scaffold_5001425 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001425 I 0.000
scaffold_402348.1 Arabidopsis lyrata scaffold_402348.1 I 0.000
S1FA1 Arabidopsis thaliana AT3G53370 I 0.000
S1FA2 Arabidopsis thaliana AT2G37120 I 0.000
S1FA3 Arabidopsis thaliana AT3G09735 D 0.000
Bostr.11793s0058 Boechera stricta Bostr.11793s0058 I 0.000
Bostr.22252s0094 Boechera stricta Bostr.22252s0094 I 0.000
Bostr.23794s0377 Boechera stricta Bostr.23794s0377 I 0.000
Bo00703s150 Brassica oleracea Bo00703s150 I 0.000
Bo00703s130 Brassica oleracea Bo00703s130 I 0.000
Bo3g061880 Brassica oleracea Bo3g061880 I 0.000
Bo1g144300 Brassica oleracea Bo1g144300 I 0.000
Bo6g067310 Brassica oleracea Bo6g067310 I 0.000
Bra039779 Brassica rapa Bra039779 I 0.000
Bra003132 Brassica rapa Bra003132 I 0.000
Bra006994 Brassica rapa Bra006994 I 0.000
Bra029784 Brassica rapa Bra029784 I 0.000
Bra034084 Brassica rapa Bra034084 I 0.000
PK08477.1 Cannabis sativa PK08477.1 I 0.000
Cagra.2515s0064 Capsella grandiflora Cagra.2515s0064 I 0.000
Cagra.0612s0062 Capsella grandiflora Cagra.0612s0062 I 0.000
Cagra.0666s0032 Capsella grandiflora Cagra.0666s0032 I 0.000
Carubv10015035m.g Capsella rubella Carubv10015035m.g I 0.000
Carubv10018341m.g Capsella rubella Carubv10018341m.g I 0.000
Carubv10025429m.g Capsella rubella Carubv10025429m.g I 0.000
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I 0.000
Ca_12027 Cicer arietinum Ca_12027 I 0.000
Cla018106 Citrullus lanatus Cla018106 I 0.000
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I 0.000
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I 0.000
Cucsa.307040 Cucumis sativus Cucsa.307040 I 0.000
Cucsa.124240 Cucumis sativus Cucsa.124240 I 0.000
Thhalv10017496m.g Eutrema salsugineum Thhalv10017496m.g I 0.000
Thhalv10010878m.g Eutrema salsugineum Thhalv10010878m.g I 0.000
Thhalv10021874m.g Eutrema salsugineum Thhalv10021874m.g I 0.000
GLYMA03G33640 Glycine max GLYMA03G33640 I 0.000
GLYMA10G05790 Glycine max GLYMA10G05790 I 0.000
GLYMA19G36350 Glycine max GLYMA19G36350 I 0.000
GLYMA13G20160 Glycine max GLYMA13G20160 I 0.000
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I 0.000
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I 0.000
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I 0.000
LPERR04G08410 Leersia perrieri LPERR04G08410 I 0.000
Lus10015073.g Linum usitatissimum Lus10015073.g I 0.000
Lus10023177.g Linum usitatissimum Lus10023177.g I 0.000
chr1.CM0033.550.nc Lotus japonicus chr1.CM0033.550.nc I 0.000
MTR_7g100905 Medicago truncatula MTR_7g100905 I 0.000
MTR_7g100890 Medicago truncatula MTR_7g100890 I 0.000
MTR_7g100880 Medicago truncatula MTR_7g100880 I 0.000
mgf000337m Mimulus guttatus mgf000337m I 0.000
mgf004062m Mimulus guttatus mgf004062m I 0.000
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I 0.000
OB04G18770 Oryza brachyantha OB04G18770 I 0.000
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I 0.000
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I 0.000
29805.m001471 Ricinus communis 29805.m001471 I 0.000
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I 0.000
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I 0.000
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I 0.000
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I 0.000
PGSC0003DMG400020934 Solanum tuberosum PGSC0003DMG400020934 I 0.000
PGSC0003DMG401017590 Solanum tuberosum PGSC0003DMG401017590 I 0.000
TCM_022113 Theobroma cacao TCM_022113 I 0.000
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I 0.000