Cucsa.359390 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.359390 T007103_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF043
M01627_2.00
Arabidopsis thaliana
YRCCGACA

TGTCGGYR
PBM
Weirauch et al.(2014)
pTH7413
0.692 0.820
ERF043
M06651_2.00
Arabidopsis thaliana
NNYCACCGACANHNNN

NNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a
0.692 0.820
ERF043
M06652_2.00
Arabidopsis thaliana
NNYCACCGACANHNNH

DNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_col
0.692 0.820
TINY
M01094_2.00
Arabidopsis thaliana
NHRCCGACAN

NTGTCGGYDN
PBM
Lambert et al.(2019)
pTH11541
0.690 0.840
TINY
M06669_2.00
Arabidopsis thaliana
HNYCRCCGACANHDN

NHDNTGTCGGYGRND
Dap-seq
OMalley et al.(2016)
TINY_col_a
0.690 0.840
ERF034
M06614_2.00
Arabidopsis thaliana
NHNYCACCGACANHD

HDNTGTCGGTGRNDN
Dap-seq
OMalley et al.(2016)
At2g44940_col_a
0.687 0.820
ERF034
M06615_2.00
Arabidopsis thaliana
NDBCACCGACANH

DNTGTCGGTGVHN
Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a
0.687 0.820
ERF035
M06631_2.00
Arabidopsis thaliana
YCACCGACANWDNH

DNHWNTGTCGGTGR
Dap-seq
OMalley et al.(2016)
AT3G60490_col_a
0.680 0.800
ERF035
M06632_2.00
Arabidopsis thaliana
NNBCACCGACAHWNNN

NNNWDTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a
0.680 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.359390.1 AP2 33 84

Links

Other AP2 family TFs
Other Cucumis sativus TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla015715 Citrullus lanatus Cla015715 I 0.801
Lus10038270.g Linum usitatissimum Lus10038270.g I 0.762
Lus10025834.g Linum usitatissimum Lus10025834.g I 0.759
evm.TU.supercontig_109.32 Carica papaya evm.TU.supercontig_109.32 I 0.745
GSMUA_Achr10G27680_001 Musa acuminata GSMUA_Achr10G27680_001 I 0.741
POPTR_0003s04920 Populus trichocarpa POPTR_0003s04920 I 0.735
Bra003415 Brassica rapa Bra003415 I 0.732
Bo6g077080 Brassica oleracea Bo6g077080 I 0.732
Bra036552 Brassica rapa Bra036552 I 0.727
Bo9g011210 Brassica oleracea Bo9g011210 I 0.727
Thhalv10004870m.g Eutrema salsugineum Thhalv10004870m.g I 0.727
Bra007539 Brassica rapa Bra007539 I 0.723
Thhalv10006200m.g Eutrema salsugineum Thhalv10006200m.g I 0.723
Bo8g095240 Brassica oleracea Bo8g095240 I 0.723
Solyc05g050830.1 Solanum lycopersicum Solyc05g050830.1 I 0.722
PGSC0003DMG400007025 Solanum tuberosum PGSC0003DMG400007025 I 0.722
SapurV1A.0805s0100 Salix purpurea SapurV1A.0805s0100 I 0.722
Solyc01g090560.2 Solanum lycopersicum Solyc01g090560.2 I 0.720
PGSC0003DMG400026035 Solanum tuberosum PGSC0003DMG400026035 I 0.720
PGSC0003DMG400026461 Solanum tuberosum PGSC0003DMG400026461 I 0.717
Solyc12g044390.1 Solanum lycopersicum Solyc12g044390.1 I 0.717
Cla012859 Citrullus lanatus Cla012859 I 0.716
Cucsa.038760 Cucumis sativus Cucsa.038760 I 0.716
Gorai.001G049800 Gossypium raimondii Gorai.001G049800 I 0.716
POPTR_0001s18800 Populus trichocarpa POPTR_0001s18800 I 0.707
TCM_028851 Theobroma cacao TCM_028851 I 0.706
ORUFI04G22400 Oryza rufipogon ORUFI04G22400 I 0.703
ORGLA04G0178600 Oryza glaberrima ORGLA04G0178600 I 0.703
ORGLA02G0228000 Oryza glaberrima ORGLA02G0228000 I 0.703
OPUNC04G18500 Oryza punctata OPUNC04G18500 I 0.703
Pavir.Ga01095 Panicum virgatum Pavir.Ga01095 I 0.703
OS02G0656600 Oryza sativa OS02G0656600 I 0.703
Sb06g024530 Sorghum bicolor Sb06g024530 I 0.703
Si010703m.g Setaria italica Si010703m.g I 0.703
OS04G0549700 Oryza sativa OS04G0549700 I 0.703
PGSC0003DMG400004826 Solanum tuberosum PGSC0003DMG400004826 I 0.703
OPUNC02G24210 Oryza punctata OPUNC02G24210 I 0.703
Pavir.J17742 Panicum virgatum Pavir.J17742 I 0.703
ONIVA04G19040 Oryza nivara ONIVA04G19040 I 0.703
Traes_2BL_593E1CCC2 Triticum aestivum Traes_2BL_593E1CCC2 I 0.703
BRADI3G50620 Brachypodium distachyon BRADI3G50620 I 0.703
BGIOSGA016882 Oryza indica BGIOSGA016882 I 0.703
Traes_2AL_45E6314EF Triticum aestivum Traes_2AL_45E6314EF I 0.703
OGLUM02G27010 Oryza glumaepatula OGLUM02G27010 I 0.703
ONIVA02G28960 Oryza nivara ONIVA02G28960 I 0.703
OMERI04G17260 Oryza meridionalis OMERI04G17260 I 0.703
OGLUM04G20750 Oryza glumaepatula OGLUM04G20750 I 0.703
OMERI02G25900 Oryza meridionalis OMERI02G25900 I 0.703
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I 0.701
SELMODRAFT_104978 Selaginella moellendorffii SELMODRAFT_104978 I 0.700
SELMODRAFT_125385 Selaginella moellendorffii SELMODRAFT_125385 I 0.700
Bra037041 Brassica rapa Bra037041 I 0.700
Cla021417 Citrullus lanatus Cla021417 I 0.700
Bra034535 Brassica rapa Bra034535 I 0.699
Bo7g115860 Brassica oleracea Bo7g115860 I 0.699
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I 0.699
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I 0.699
Bo3g171090 Brassica oleracea Bo3g171090 I 0.699
SELMODRAFT_71661 Selaginella moellendorffii SELMODRAFT_71661 I 0.698
SELMODRAFT_71659 Selaginella moellendorffii SELMODRAFT_71659 I 0.698
mgf022971m Mimulus guttatus mgf022971m I 0.697
Lus10002801.g Linum usitatissimum Lus10002801.g I 0.696
Lus10001601.g Linum usitatissimum Lus10001601.g I 0.696
Cucsa.259750 Cucumis sativus Cucsa.259750 I 0.696
Ca_14911 Cicer arietinum Ca_14911 I 0.695
Solyc08g078410.1 Solanum lycopersicum Solyc08g078410.1 I 0.695
Solyc08g078420.1 Solanum lycopersicum Solyc08g078420.1 I 0.695
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I 0.695
PGSC0003DMG400004825 Solanum tuberosum PGSC0003DMG400004825 I 0.695
SapurV1A.2848s0020 Salix purpurea SapurV1A.2848s0020 I 0.694
30146.m003535 Ricinus communis 30146.m003535 I 0.694
SapurV1A.0370s0130 Salix purpurea SapurV1A.0370s0130 I 0.694
Traes_6DL_901793D6D Triticum aestivum Traes_6DL_901793D6D I 0.693
MLOC_75601 Hordeum vulgare MLOC_75601 I 0.693
MTR_1g006660 Medicago truncatula MTR_1g006660 I 0.693
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I 0.692
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I 0.692
Carubv10006567m.g Capsella rubella Carubv10006567m.g I 0.692
ERF043 Arabidopsis thaliana AT4G32800 D 0.692
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I 0.692
Bra009862 Brassica rapa Bra009862 I 0.690
VIT_09s0002g03940 Vitis vinifera VIT_09s0002g03940 I 0.690
Carubv10002601m.g Capsella rubella Carubv10002601m.g I 0.690
TINY Arabidopsis thaliana AT5G25810 D 0.690
Bo7g095710 Brassica oleracea Bo7g095710 I 0.690
Ciclev10006536m.g Citrus clementina Ciclev10006536m.g I 0.689
30174.m008790 Ricinus communis 30174.m008790 I 0.689
orange1.1g041015m.g Citrus sinensis orange1.1g041015m.g I 0.689
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I 0.688
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I 0.687
Carubv10023699m.g Capsella rubella Carubv10023699m.g I 0.687
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I 0.687
Lus10038607.g Linum usitatissimum Lus10038607.g I 0.687
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I 0.687
Bostr.29827s0238 Boechera stricta Bostr.29827s0238 I 0.687
ERF034 Arabidopsis thaliana AT2G44940 D 0.687
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I 0.687
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I 0.687
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I 0.686
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I 0.686
TCM_005639 Theobroma cacao TCM_005639 I 0.686
Pm017610 Prunus mume Pm017610 I 0.686
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I 0.686
cassava19912.m1 Manihot esculenta cassava19912.m1 I 0.685
cassava19875.m1 Manihot esculenta cassava19875.m1 I 0.685
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I 0.684
Solyc03g120840.1 Solanum lycopersicum Solyc03g120840.1 I 0.683
MDP0000790788 Malus domestica MDP0000790788 I 0.682
Bra027177 Brassica rapa Bra027177 I 0.682
Bo5g126280 Brassica oleracea Bo5g126280 I 0.682
Bo4g024220 Brassica oleracea Bo4g024220 I 0.681
Bra040333 Brassica rapa Bra040333 I 0.681
Bo4g195280 Brassica oleracea Bo4g195280 I 0.681
Bra004878 Brassica rapa Bra004878 I 0.681
PGSC0003DMG400002620 Solanum tuberosum PGSC0003DMG400002620 I 0.681
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I 0.681
TCM_014892 Theobroma cacao TCM_014892 I 0.681
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I 0.680
ERF035 Arabidopsis thaliana AT3G60490 D 0.680
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I 0.680
Carubv10014506m.g Capsella rubella Carubv10014506m.g I 0.679
Cagra.6624s0013 Capsella grandiflora Cagra.6624s0013 I 0.679
Thhalv10022278m.g Eutrema salsugineum Thhalv10022278m.g I 0.679
scaffold_301905.1 Arabidopsis lyrata scaffold_301905.1 I 0.679
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I 0.679
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I 0.678
Carubv10017799m.g Capsella rubella Carubv10017799m.g I 0.678