e_gw1.30.170.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 e_gw1.30.170.1 T007151_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRF2
M01622_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8680 		0.687 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.30.170.1 AP2 28 67

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.2151s0020 Salix purpurea SapurV1A.2151s0020 I 0.705
SapurV1A.1043s0120 Salix purpurea SapurV1A.1043s0120 I 0.705
SapurV1A.1442s0010 Salix purpurea SapurV1A.1442s0010 I 0.705
cassava32471.m1 Manihot esculenta cassava32471.m1 I 0.704
gene13118-v1.0-hybrid Fragaria vesca gene13118-v1.0-hybrid I 0.702
estExt_fgenesh1_pg.C_210126 Physcomitrella patens estExt_fgenesh1_pg.C_210126 I 0.700
gw1.7.214.1 Physcomitrella patens gw1.7.214.1 I 0.700
POPTR_0012s01260 Populus trichocarpa POPTR_0012s01260 I 0.698
AMTR_s00097p00165740 Amborella trichopoda AMTR_s00097p00165740 I 0.697
orange1.1g047455m.g Citrus sinensis orange1.1g047455m.g I 0.697
e_gw1.7.264.1 Physcomitrella patens e_gw1.7.264.1 I 0.697
gw1.126.81.1 Physcomitrella patens gw1.126.81.1 I 0.697
Ciclev10005220m.g Citrus clementina Ciclev10005220m.g I 0.697
Gorai.006G200400 Gossypium raimondii Gorai.006G200400 I 0.696
Cla004291 Citrullus lanatus Cla004291 I 0.696
VIT_16s0050g02400 Vitis vinifera VIT_16s0050g02400 I 0.696
TCM_015336 Theobroma cacao TCM_015336 I 0.696
Eucgr.K00321 Eucalyptus grandis Eucgr.K00321 I 0.696
Eucgr.A02669 Eucalyptus grandis Eucgr.A02669 I 0.696
cassava7228.valid.m1 Manihot esculenta cassava7228.valid.m1 I 0.696
mgf018116m Mimulus guttatus mgf018116m I 0.696
PK28823.1 Cannabis sativa PK28823.1 I 0.696
Cucsa.012850 Cucumis sativus Cucsa.012850 I 0.696
Gorai.008G271200 Gossypium raimondii Gorai.008G271200 I 0.696
PGSC0003DMG400002350 Solanum tuberosum PGSC0003DMG400002350 I 0.696
PGSC0003DMG400036493 Solanum tuberosum PGSC0003DMG400036493 I 0.696
Solyc06g051840.1 Solanum lycopersicum Solyc06g051840.1 I 0.696
Solyc03g007460.1 Solanum lycopersicum Solyc03g007460.1 I 0.696
GLYMA04G41740 Glycine max GLYMA04G41740 I 0.696
GLYMA06G13040 Glycine max GLYMA06G13040 I 0.696
Aquca_037_00045 Aquilegia coerulea Aquca_037_00045 I 0.695
GLYMA01G43350 Glycine max GLYMA01G43350 I 0.694
GLYMA11G02140 Glycine max GLYMA11G02140 I 0.694
Carubv10001539m.g Capsella rubella Carubv10001539m.g I 0.694
gw1.293.27.1 Physcomitrella patens gw1.293.27.1 I 0.693
Bo3g045150 Brassica oleracea Bo3g045150 I 0.693
gw1.293.28.1 Physcomitrella patens gw1.293.28.1 I 0.693
30169.m006542 Ricinus communis 30169.m006542 I 0.693
Thhalv10029132m.g Eutrema salsugineum Thhalv10029132m.g I 0.693
Bostr.25463s0212 Boechera stricta Bostr.25463s0212 I 0.693
GLYMA03G41640 Glycine max GLYMA03G41640 I 0.692
e_gw1.21.268.1 Physcomitrella patens e_gw1.21.268.1 I 0.692
GLYMA08G02460 Glycine max GLYMA08G02460 I 0.692
CRF1 Arabidopsis thaliana AT4G11140 I 0.691
CRF1 Arabidopsis lyrata fgenesh2_kg.6__3086__AT4G11140.1 I 0.691
GLYMA03G23330 Glycine max GLYMA03G23330 I 0.689
CRF2 Arabidopsis thaliana AT4G23750 D 0.687
Cagra.1226s0039 Capsella grandiflora Cagra.1226s0039 I 0.687
Carubv10005160m.g Capsella rubella Carubv10005160m.g I 0.687
CRF2 Arabidopsis lyrata fgenesh2_kg.7__1924__AT4G23750.1 I 0.687
Bostr.7867s0178 Boechera stricta Bostr.7867s0178 I 0.687
POPTR_0015s06070 Populus trichocarpa POPTR_0015s06070 I 0.686
SapurV1A.1017s0070 Salix purpurea SapurV1A.1017s0070 I 0.686
VIT_06s0004g08190 Vitis vinifera VIT_06s0004g08190 I 0.685
GLYMA19G44240 Glycine max GLYMA19G44240 I 0.684
mgf023807m Mimulus guttatus mgf023807m I 0.683
e_gw1.117.76.1 Physcomitrella patens e_gw1.117.76.1 I 0.682
mgf022434m Mimulus guttatus mgf022434m I 0.682
MDP0000854039 Malus domestica MDP0000854039 I 0.682
MDP0000308379 Malus domestica MDP0000308379 I 0.682
SapurV1A.1111s0070 Salix purpurea SapurV1A.1111s0070 I 0.681
cassava27467.m1 Manihot esculenta cassava27467.m1 I 0.681
MTR_3g090760 Medicago truncatula MTR_3g090760 I 0.681
GLYMA02G40320 Glycine max GLYMA02G40320 I 0.681
PRUPE_ppa008720mg Prunus persica PRUPE_ppa008720mg I 0.681
Ca_03948 Cicer arietinum Ca_03948 I 0.681
Pm019793 Prunus mume Pm019793 I 0.681
28641.m000082 Ricinus communis 28641.m000082 I 0.681
Cucsa.107190 Cucumis sativus Cucsa.107190 I 0.680
TCM_005203 Theobroma cacao TCM_005203 I 0.680
Cla011108 Citrullus lanatus Cla011108 I 0.680
Gorai.007G105700 Gossypium raimondii Gorai.007G105700 I 0.680
Gorai.007G105600 Gossypium raimondii Gorai.007G105600 I 0.680
chr2.CM0060.150.nc Lotus japonicus chr2.CM0060.150.nc I 0.678
Cagra.16778s0005 Capsella grandiflora Cagra.16778s0005 I 0.678