gw1.105.71.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.105.71.1 T007251_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK17878.1
M01099_2.00
Cannabis sativa
CGCCGYCR

YGRCGGCG
PBM
Lambert et al.(2019)
pTH10133
0.704 0.848
A5JTT1_WHEAT
M09700_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_01
0.679 0.717
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.105.71.1 AP2 1 51

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.742
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.730
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.727
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I 0.725
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I 0.725
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I 0.714
MDP0000907929 Malus domestica MDP0000907929 I 0.714
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I 0.714
MDP0000189033 Malus domestica MDP0000189033 I 0.714
MDP0000133485 Malus domestica MDP0000133485 I 0.714
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.713
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.713
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.713
PK02998.1 Cannabis sativa PK02998.1 I 0.713
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.713
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I 0.713
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.713
MDP0000317950 Malus domestica MDP0000317950 I 0.710
MDP0000153445 Malus domestica MDP0000153445 I 0.710
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I 0.709
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I 0.709
Aquca_036_00073 Aquilegia coerulea Aquca_036_00073 I 0.708
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.708
Cucsa.126860 Cucumis sativus Cucsa.126860 I 0.707
Cla020002 Citrullus lanatus Cla020002 I 0.707
Ca_12205 Cicer arietinum Ca_12205 I 0.706
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I 0.706
AMTR_s00077p00176570 Amborella trichopoda AMTR_s00077p00176570 I 0.705
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.705
Ciclev10021132m.g Citrus clementina Ciclev10021132m.g I 0.705
Pm010083 Prunus mume Pm010083 I 0.704
PK17878.1 Cannabis sativa PK17878.1 D 0.704
GLYMA15G08360 Glycine max GLYMA15G08360 I 0.704
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I 0.704
30190.m011323 Ricinus communis 30190.m011323 I 0.704
Ca_00326 Cicer arietinum Ca_00326 I 0.704
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I 0.704
ERF12 Vitis vinifera VIT_10s0003g00130 I 0.704
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I 0.704
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I 0.704
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I 0.704
mgf023367m Mimulus guttatus mgf023367m I 0.704
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I 0.704
cassava4486.m1 Manihot esculenta cassava4486.m1 I 0.704
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I 0.704
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I 0.704
Pm020210 Prunus mume Pm020210 I 0.704
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I 0.704
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I 0.704
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I 0.704
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I 0.704
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I 0.704
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I 0.704
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I 0.704
MTR_2g014300 Medicago truncatula MTR_2g014300 I 0.704
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I 0.704
TCM_029823 Theobroma cacao TCM_029823 I 0.704
GLYMA13G31010 Glycine max GLYMA13G31010 I 0.704
Ciclev10022025m.g Citrus clementina Ciclev10022025m.g I 0.701
orange1.1g047100m.g Citrus sinensis orange1.1g047100m.g I 0.701
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I 0.700
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I 0.700
gene21403-v1.0-hybrid Fragaria vesca gene21403-v1.0-hybrid I 0.699
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I 0.697
29640.m000403 Ricinus communis 29640.m000403 I 0.695
PGSC0003DMG400022305 Solanum tuberosum PGSC0003DMG400022305 I 0.695
MDP0000310904 Malus domestica MDP0000310904 I 0.694
MDP0000236605 Malus domestica MDP0000236605 I 0.694
Cagra.1822s0023 Capsella grandiflora Cagra.1822s0023 I 0.693
ERF12 Arabidopsis thaliana AT1G28360 I 0.693
Thhalv10009947m.g Eutrema salsugineum Thhalv10009947m.g I 0.693
Bo3g143340 Brassica oleracea Bo3g143340 I 0.693
Carubv10011585m.g Capsella rubella Carubv10011585m.g I 0.693
Bostr.15697s0156 Boechera stricta Bostr.15697s0156 I 0.693
Bo7g048190 Brassica oleracea Bo7g048190 I 0.693
Bra010881 Brassica rapa Bra010881 I 0.693
ERF12 Arabidopsis lyrata fgenesh2_kg.1__3004__AT1G28360.1 I 0.693
Bra032898 Brassica rapa Bra032898 I 0.693
Bra030094 Brassica rapa Bra030094 I 0.693
Bo5g055840 Brassica oleracea Bo5g055840 I 0.693
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I 0.692
PGSC0003DMG400014417 Solanum tuberosum PGSC0003DMG400014417 I 0.691
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.690
MDP0000457509 Malus domestica MDP0000457509 I 0.690
Si003053m.g Setaria italica Si003053m.g I 0.689
BRADI2G52380 Brachypodium distachyon BRADI2G52380 I 0.689
TRAES3BF075600040CFD_g Triticum aestivum TRAES3BF075600040CFD_g I 0.689
MLOC_66843 Hordeum vulgare MLOC_66843 I 0.688
Ciclev10016668m.g Citrus clementina Ciclev10016668m.g I 0.687
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I 0.687
mgf016282m Mimulus guttatus mgf016282m I 0.687
orange1.1g027990m.g Citrus sinensis orange1.1g027990m.g I 0.687
gene01152-v1.0-hybrid Fragaria vesca gene01152-v1.0-hybrid I 0.687
MDP0000839828 Malus domestica MDP0000839828 I 0.687
SELMODRAFT_73144 Selaginella moellendorffii SELMODRAFT_73144 I 0.687
Pm014953 Prunus mume Pm014953 I 0.687
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I 0.687
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I 0.687
SELMODRAFT_72880 Selaginella moellendorffii SELMODRAFT_72880 I 0.687
orange1.1g032263m.g Citrus sinensis orange1.1g032263m.g I 0.686
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I 0.686
mgf007166m Mimulus guttatus mgf007166m I 0.686
SELMODRAFT_59974 Selaginella moellendorffii SELMODRAFT_59974 I 0.686
Ciclev10022734m.g Citrus clementina Ciclev10022734m.g I 0.686
PK25211.1 Cannabis sativa PK25211.1 I 0.684
Solyc07g064890.1 Solanum lycopersicum Solyc07g064890.1 I 0.684
Ciclev10009361m.g Citrus clementina Ciclev10009361m.g I 0.684
orange1.1g045783m.g Citrus sinensis orange1.1g045783m.g I 0.684
Aquca_027_00311 Aquilegia coerulea Aquca_027_00311 I 0.683
Pm011907 Prunus mume Pm011907 I 0.682
MDP0000629527 Malus domestica MDP0000629527 I 0.682
MDP0000542633 Malus domestica MDP0000542633 I 0.682
TCM_030804 Theobroma cacao TCM_030804 I 0.681
Solyc10g006130.1 Solanum lycopersicum Solyc10g006130.1 I 0.680
A5JTT1_WHEAT Triticum aestivum A5JTT1_WHEAT D 0.679
Cla013723 Citrullus lanatus Cla013723 I 0.677