gw1.115.66.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.115.66.1 T007252_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.679 0.692
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.679 0.692
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.679 0.692
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.115.66.1 AP2 1 53

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_1g048610 Medicago truncatula MTR_1g048610 I 0.754
e_gw1.357.22.1 Physcomitrella patens e_gw1.357.22.1 I 0.731
TCM_029772 Theobroma cacao TCM_029772 I 0.728
orange1.1g037347m.g Citrus sinensis orange1.1g037347m.g I 0.728
Ciclev10018130m.g Citrus clementina Ciclev10018130m.g I 0.728
evm.TU.supercontig_7.36 Carica papaya evm.TU.supercontig_7.36 I 0.728
Eucgr.E02652 Eucalyptus grandis Eucgr.E02652 I 0.728
GLYMA13G30710 Glycine max GLYMA13G30710 I 0.728
Eucgr.E03167 Eucalyptus grandis Eucgr.E03167 I 0.728
CM1489.100.nc Lotus japonicus CM1489.100.nc I 0.728
cassava3045.m1 Manihot esculenta cassava3045.m1 I 0.728
GLYMA15G08580 Glycine max GLYMA15G08580 I 0.727
Gorai.010G156500 Gossypium raimondii Gorai.010G156500 I 0.719
POPTR_0004s05110 Populus trichocarpa POPTR_0004s05110 I 0.715
SapurV1A.0012s0900 Salix purpurea SapurV1A.0012s0900 I 0.715
Pm010367 Prunus mume Pm010367 I 0.713
PRUPE_ppa022010mg Prunus persica PRUPE_ppa022010mg I 0.713
Cla009822 Citrullus lanatus Cla009822 I 0.712
Cucsa.046660 Cucumis sativus Cucsa.046660 I 0.712
PDK_20s1325661g001 Phoenix dactylifera PDK_20s1325661g001 I 0.712
PGSC0003DMG400010719 Solanum tuberosum PGSC0003DMG400010719 I 0.710
VIT_10s0003g00590 Vitis vinifera VIT_10s0003g00590 I 0.709
Gorai.008G219300 Gossypium raimondii Gorai.008G219300 I 0.708
orange1.1g023209m.g Citrus sinensis orange1.1g023209m.g I 0.706
Ciclev10005570m.g Citrus clementina Ciclev10005570m.g I 0.706
MTR_2g015050 Medicago truncatula MTR_2g015050 I 0.706
POPTR_0011s06020 Populus trichocarpa POPTR_0011s06020 I 0.706
PDK_20s1757341g001 Phoenix dactylifera PDK_20s1757341g001 I 0.705
Solyc02g077360.1 Solanum lycopersicum Solyc02g077360.1 I 0.705
Gorai.009G165400 Gossypium raimondii Gorai.009G165400 I 0.705
Aquca_005_00139 Aquilegia coerulea Aquca_005_00139 I 0.704
AMTR_s00021p00185480 Amborella trichopoda AMTR_s00021p00185480 I 0.704
Eucgr.E03168 Eucalyptus grandis Eucgr.E03168 I 0.698
Eucgr.E00377 Eucalyptus grandis Eucgr.E00377 I 0.698
Eucgr.E02651 Eucalyptus grandis Eucgr.E02651 I 0.698
PGSC0003DMG400046646 Solanum tuberosum PGSC0003DMG400046646 I 0.697
Solyc09g089920.1 Solanum lycopersicum Solyc09g089920.1 I 0.697
Lus10025430.g Linum usitatissimum Lus10025430.g I 0.696
SapurV1A.0059s0640 Salix purpurea SapurV1A.0059s0640 I 0.695
SapurV1A.1065s0030 Salix purpurea SapurV1A.1065s0030 I 0.695
cassava4507.m1 Manihot esculenta cassava4507.m1 I 0.695
POPTR_0003s15040 Populus trichocarpa POPTR_0003s15040 I 0.695
POPTR_0001s11780 Populus trichocarpa POPTR_0001s11780 I 0.695
cassava1608.valid.m1 Manihot esculenta cassava1608.valid.m1 I 0.694
VIT_10s0003g00580 Vitis vinifera VIT_10s0003g00580 I 0.694
Eucgr.K00126 Eucalyptus grandis Eucgr.K00126 I 0.692
MDP0000689946 Malus domestica MDP0000689946 I 0.691
MDP0000805422 Malus domestica MDP0000805422 I 0.691
29900.m001559 Ricinus communis 29900.m001559 I 0.691
TRIUR3_07811 Triticum urartu TRIUR3_07811 I 0.690
Bostr.26833s0076 Boechera stricta Bostr.26833s0076 I 0.689
VIT_16s0013g01120 Vitis vinifera VIT_16s0013g01120 I 0.689
POPTR_0004s05100 Populus trichocarpa POPTR_0004s05100 I 0.689
SapurV1A.0012s0890 Salix purpurea SapurV1A.0012s0890 I 0.689
Gorai.003G112200 Gossypium raimondii Gorai.003G112200 I 0.689
VIT_16s0013g00900 Vitis vinifera VIT_16s0013g00900 I 0.689
Ciclev10016995m.g Citrus clementina Ciclev10016995m.g I 0.688
orange1.1g031071m.g Citrus sinensis orange1.1g031071m.g I 0.688
ERF104 Arabidopsis lyrata fgenesh2_kg.8__2143__AT5G61600.1 I 0.687
Lus10032499.g Linum usitatissimum Lus10032499.g I 0.687
Carubv10028209m.g Capsella rubella Carubv10028209m.g I 0.687
Cagra.0542s0055 Capsella grandiflora Cagra.0542s0055 I 0.687
Thhalv10005566m.g Eutrema salsugineum Thhalv10005566m.g I 0.687
POPTR_0003s07850 Populus trichocarpa POPTR_0003s07850 I 0.686
Lus10013958.g Linum usitatissimum Lus10013958.g I 0.686
Lus10005281.g Linum usitatissimum Lus10005281.g I 0.686
Pm010368 Prunus mume Pm010368 I 0.685
GLYMA20G16910 Glycine max GLYMA20G16910 I 0.685
CM1489.90.nc Lotus japonicus CM1489.90.nc I 0.685
PRUPE_ppa012014mg Prunus persica PRUPE_ppa012014mg I 0.685
GLYMA10G23440 Glycine max GLYMA10G23440 I 0.685
Lus10042996.g Linum usitatissimum Lus10042996.g I 0.685
gene21166-v1.0-hybrid Fragaria vesca gene21166-v1.0-hybrid I 0.684
TCM_014847 Theobroma cacao TCM_014847 I 0.683
CM0905.90.nd Lotus japonicus CM0905.90.nd I 0.682
Pm019545 Prunus mume Pm019545 I 0.682
PRUPE_ppa008915mg Prunus persica PRUPE_ppa008915mg I 0.682
Aquca_067_00006 Aquilegia coerulea Aquca_067_00006 I 0.682
Ca_00360 Cicer arietinum Ca_00360 I 0.682
Gorai.008G214000 Gossypium raimondii Gorai.008G214000 I 0.682
AMTR_s00009p00147970 Amborella trichopoda AMTR_s00009p00147970 I 0.681
Ca_00359 Cicer arietinum Ca_00359 I 0.680
MDP0000180950 Malus domestica MDP0000180950 I 0.680
Thhalv10014591m.g Eutrema salsugineum Thhalv10014591m.g I 0.680
fgenesh2_kg.8__1005__AT5G51190.1 Arabidopsis lyrata fgenesh2_kg.8__1005__AT5G51190.1 I 0.679
ERF105 Arabidopsis thaliana AT5G51190 D 0.679
Bostr.15774s0261 Boechera stricta Bostr.15774s0261 I 0.679
GLYMA13G30720 Glycine max GLYMA13G30720 I 0.678
PGSC0003DMG400013450 Solanum tuberosum PGSC0003DMG400013450 I 0.678
Solyc03g005510.1 Solanum lycopersicum Solyc03g005510.1 I 0.678
GLYMA15G08560 Glycine max GLYMA15G08560 I 0.678
MTR_2g015040 Medicago truncatula MTR_2g015040 I 0.678
Bo9g100030 Brassica oleracea Bo9g100030 I 0.677
Carubv10027063m.g Capsella rubella Carubv10027063m.g I 0.677
Aquca_005_00143 Aquilegia coerulea Aquca_005_00143 I 0.677
Bra035732 Brassica rapa Bra035732 I 0.677