gw1.120.55.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.120.55.1 T007254_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.713 0.837
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.711 0.796
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.705 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.705 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.705 0.816
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.692 0.796
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.686 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.120.55.1 AP2 36 87

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.746
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.746
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.736
Pm003634 Prunus mume Pm003634 I 0.727
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.725
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.725
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.722
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.720
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.720
Cla006713 Citrullus lanatus Cla006713 I 0.719
mgf007881m Mimulus guttatus mgf007881m I 0.717
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.717
PK07402.1 Cannabis sativa PK07402.1 D 0.713
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.713
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.711
DREB2G Arabidopsis thaliana AT5G18450 D 0.711
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.711
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.711
Bo9g155940 Brassica oleracea Bo9g155940 I 0.711
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.711
Bra002159 Brassica rapa Bra002159 I 0.711
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.711
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.711
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.709
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.709
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.709
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.708
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.708
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.707
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.707
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.707
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.707
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.706
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.706
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.706
Bra008200 Brassica rapa Bra008200 I 0.706
MDP0000141335 Malus domestica MDP0000141335 I 0.706
MDP0000295902 Malus domestica MDP0000295902 I 0.706
Bo2g083920 Brassica oleracea Bo2g083920 I 0.706
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.706
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.705
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.705
Cla021113 Citrullus lanatus Cla021113 I 0.705
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.705
DREB2D Arabidopsis thaliana AT1G75490 D 0.705
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.705
Bra015840 Brassica rapa Bra015840 I 0.705
mgf017629m Mimulus guttatus mgf017629m I 0.705
Bo6g119660 Brassica oleracea Bo6g119660 I 0.705
mgf024545m Mimulus guttatus mgf024545m I 0.705
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.705
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.704
Pm006274 Prunus mume Pm006274 I 0.704
TCM_034132 Theobroma cacao TCM_034132 I 0.704
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.704
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.704
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.703
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.703
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.703
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.703
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.703
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.703
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.702
Bra003752 Brassica rapa Bra003752 I 0.702
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.702
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.702
Bo6g086320 Brassica oleracea Bo6g086320 I 0.702
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.702
Ca_10770 Cicer arietinum Ca_10770 I 0.701
MDP0000250927 Malus domestica MDP0000250927 I 0.701
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.701
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.701
30170.m014115 Ricinus communis 30170.m014115 I 0.701
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.701
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.701
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.701
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.701
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.701
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.701
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.701
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.701
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.700
MDP0000250924 Malus domestica MDP0000250924 I 0.700
29729.m002292 Ricinus communis 29729.m002292 I 0.699
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.699
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.698
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.698
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.698
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.698
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.697
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.697
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.697
PK07829.1 Cannabis sativa PK07829.1 I 0.697
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.697
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.696
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.696
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.696
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.695
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.695
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.695
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.695
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.695
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.695
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.695
DREB2E Oryza sativa OS03G0174400 I 0.695
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.695
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.695
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.695
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.695
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.695
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.695
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.695
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.695
OBART03G05550 Oryza barthii OBART03G05550 I 0.695
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.695
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.694
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.692
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.692
27810.m000639 Ricinus communis 27810.m000639 I 0.692
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.692
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.692
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.692
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.692
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.692
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.692
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.692
Ca_07264 Cicer arietinum Ca_07264 I 0.692
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.692
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.692
TCM_024756 Theobroma cacao TCM_024756 I 0.692
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.692
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.692
PK08602.1 Cannabis sativa PK08602.1 D 0.692
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.692
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.691
Bra023674 Brassica rapa Bra023674 I 0.691
Bo2g016490 Brassica oleracea Bo2g016490 I 0.691
Ca_12446 Cicer arietinum Ca_12446 I 0.691
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.689
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.689
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.689
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.688
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.688
29680.m001737 Ricinus communis 29680.m001737 I 0.688
TCM_026121 Theobroma cacao TCM_026121 I 0.688
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.687
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.687
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.687
MDP0000703626 Malus domestica MDP0000703626 I 0.686
MDP0000290585 Malus domestica MDP0000290585 I 0.686
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.686
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.686
Pm025865 Prunus mume Pm025865 I 0.686
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.686
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.686
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.686
F775_05774 Aegilops tauschii F775_05774 I 0.686
MDP0000871361 Malus domestica MDP0000871361 I 0.686
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.686
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.686
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.686
Pm015262 Prunus mume Pm015262 I 0.684
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.684
Bo9g177130 Brassica oleracea Bo9g177130 I 0.684
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.684
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.684
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.683
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.683
Bra028759 Brassica rapa Bra028759 I 0.683
DREB2A Oryza sativa OS01G0165000 I 0.683
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.683
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.683
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.683
OB01G13930 Oryza brachyantha OB01G13930 I 0.683
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.683
Bo2g006960 Brassica oleracea Bo2g006960 I 0.683
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.683
OBART01G04210 Oryza barthii OBART01G04210 I 0.683
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.683
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.683
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.682
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.682
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.682
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.681
TCM_043275 Theobroma cacao TCM_043275 I 0.680
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.680
MDP0000153866 Malus domestica MDP0000153866 I 0.680
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.680
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.680
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.680
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.679
MDP0000147009 Malus domestica MDP0000147009 I 0.678
MDP0000446783 Malus domestica MDP0000446783 I 0.678
MDP0000165880 Malus domestica MDP0000165880 I 0.677
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.677