gw1.133.82.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.133.82.1 T007260_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
estExt_gwp_gw1.C_550163
M01640_2.00
Physcomitrella patens
NCACCGACHN

NDGTCGGTGN
PBM
Weirauch et al.(2014)
pTH8472
0.790 0.958
estExt_fgenesh1_pg.C_4800009
M01639_2.00
Physcomitrella patens
MACCGACM

KGTCGGTK
PBM
Weirauch et al.(2014)
pTH8488
0.757 0.938
gw1.8.141.1
M01642_2.00
Physcomitrella patens
CACCGACM

KGTCGGTG
PBM
Weirauch et al.(2014)
pTH8456
0.704 0.896
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.133.82.1 AP2 1 50

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

Invalid Input OrderBy

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action